Cluster: MGYG000002148_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002148
- CGC Family ID: CGCFAM_03930
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002148_1 | MGYG000002148_1_308 | 351802 | 352821 | + | GH179 |
| pfam | MGYG000002148_1 | MGYG000002148_1_309 | 353125 | 354402 | + | PGI |
| CAZyme | MGYG000002148_1 | MGYG000002148_1_310 | 354455 | 355525 | + | GH177 |
| pfam | MGYG000002148_1 | MGYG000002148_1_311 | 355554 | 356405 | + | AP_endonuc_2 |
| TC | MGYG000002148_1 | MGYG000002148_1_312 | 356490 | 357857 | + | 3.A.1.1.40 |
| TC | MGYG000002148_1 | MGYG000002148_1_313 | 357934 | 358863 | + | 3.A.1.1.11 |
| TC | MGYG000002148_1 | MGYG000002148_1_314 | 358874 | 359716 | + | 3.A.1.1.11 |
Gene ID: MGYG000002148_1_308
Type: CAZyme
Location: 351802 - 352821 (+)
Type: CAZyme
Location: 351802 - 352821 (+)
Gene ID: MGYG000002148_1_309
Type: pfam
Location: 353125 - 354402 (+)
Type: pfam
Location: 353125 - 354402 (+)
Gene ID: MGYG000002148_1_310
Type: CAZyme
Location: 354455 - 355525 (+)
Type: CAZyme
Location: 354455 - 355525 (+)
Gene ID: MGYG000002148_1_311
Type: pfam
Location: 355554 - 356405 (+)
Type: pfam
Location: 355554 - 356405 (+)
Gene ID: MGYG000002148_1_312
Type: TC
Location: 356490 - 357857 (+)
Type: TC
Location: 356490 - 357857 (+)
Gene ID: MGYG000002148_1_313
Type: TC
Location: 357934 - 358863 (+)
Type: TC
Location: 357934 - 358863 (+)
Gene ID: MGYG000002148_1_314
Type: TC
Location: 358874 - 359716 (+)
Type: TC
Location: 358874 - 359716 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.