Cluster: MGYG000002148_CGC47
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000002148
- CGC Family ID: CGCFAM_00736
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002148_13 | MGYG000002148_13_17 | 17998 | 20070 | - | GH3 |
| CAZyme | MGYG000002148_13 | MGYG000002148_13_18 | 20151 | 22481 | - | GH31_3 |
| peptidase | MGYG000002148_13 | MGYG000002148_13_19 | 22583 | 23698 | - | S09.UPW |
| CAZyme | MGYG000002148_13 | MGYG000002148_13_20 | 23679 | 25742 | - | GH42 |
| CAZyme | MGYG000002148_13 | MGYG000002148_13_21 | 25788 | 28616 | - | GH3 |
| TC | MGYG000002148_13 | MGYG000002148_13_22 | 28867 | 30549 | - | 3.A.1.1.29 |
| TC | MGYG000002148_13 | MGYG000002148_13_23 | 30608 | 31504 | - | 3.A.1.1.29 |
| TC | MGYG000002148_13 | MGYG000002148_13_24 | 31519 | 32460 | - | 3.A.1.1.29 |
| TF | MGYG000002148_13 | MGYG000002148_13_25 | 32561 | 34090 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000002148_13 | MGYG000002148_13_26 | 34100 | 35893 | - | 8.A.59.2.1 |
Gene ID: MGYG000002148_13_17
Type: CAZyme
Location: 17998 - 20070 (-)
Type: CAZyme
Location: 17998 - 20070 (-)
Gene ID: MGYG000002148_13_18
Type: CAZyme
Location: 20151 - 22481 (-)
Type: CAZyme
Location: 20151 - 22481 (-)
Gene ID: MGYG000002148_13_19
Type: peptidase
Location: 22583 - 23698 (-)
Type: peptidase
Location: 22583 - 23698 (-)
Gene ID: MGYG000002148_13_20
Type: CAZyme
Location: 23679 - 25742 (-)
Type: CAZyme
Location: 23679 - 25742 (-)
Gene ID: MGYG000002148_13_21
Type: CAZyme
Location: 25788 - 28616 (-)
Type: CAZyme
Location: 25788 - 28616 (-)
Gene ID: MGYG000002148_13_22
Type: TC
Location: 28867 - 30549 (-)
Type: TC
Location: 28867 - 30549 (-)
Gene ID: MGYG000002148_13_23
Type: TC
Location: 30608 - 31504 (-)
Type: TC
Location: 30608 - 31504 (-)
Gene ID: MGYG000002148_13_24
Type: TC
Location: 31519 - 32460 (-)
Type: TC
Location: 31519 - 32460 (-)
Gene ID: MGYG000002148_13_25
Type: TF
Location: 32561 - 34090 (-)
Type: TF
Location: 32561 - 34090 (-)
Gene ID: MGYG000002148_13_26
Type: TC
Location: 34100 - 35893 (-)
Type: TC
Location: 34100 - 35893 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.