Cluster: MGYG000002148_CGC42
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000002148
- CGC Family ID: CGCFAM_00009
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002148_11 | MGYG000002148_11_50 | 62570 | 63562 | + | 3.A.1.104.1 |
| TC | MGYG000002148_11 | MGYG000002148_11_51 | 63803 | 65179 | + | 3.A.1.103.6 |
| pfam | MGYG000002148_11 | MGYG000002148_11_52 | 65184 | 67331 | + | PCMT | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| CAZyme | MGYG000002148_11 | MGYG000002148_11_53 | 67316 | 69313 | + | GT2 |
| pfam | MGYG000002148_11 | MGYG000002148_11_54 | 69405 | 71015 | + | PDDEXK_9 | AAA-ATPase_like |
| CAZyme | MGYG000002148_11 | MGYG000002148_11_55 | 71307 | 73298 | + | GT2 | GT2 |
| pfam | MGYG000002148_11 | MGYG000002148_11_56 | 73362 | 75083 | + | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | MGYG000002148_11 | MGYG000002148_11_57 | 75277 | 76626 | + | GT2 |
| CAZyme | MGYG000002148_11 | MGYG000002148_11_58 | 76667 | 77623 | + | GT2 |
| TC | MGYG000002148_11 | MGYG000002148_11_59 | 77690 | 79108 | + | 9.B.18.1.1 |
| pfam | MGYG000002148_11 | MGYG000002148_11_60 | 79167 | 80270 | + | LytR_cpsA_psr |
| CAZyme | MGYG000002148_11 | MGYG000002148_11_61 | 80414 | 81337 | + | GT2 |
Gene ID: MGYG000002148_11_50
Type: TC
Location: 62570 - 63562 (+)
Type: TC
Location: 62570 - 63562 (+)
Gene ID: MGYG000002148_11_51
Type: TC
Location: 63803 - 65179 (+)
Type: TC
Location: 63803 - 65179 (+)
Gene ID: MGYG000002148_11_52
Type: pfam
Location: 65184 - 67331 (+)
Type: pfam
Location: 65184 - 67331 (+)
Gene ID: MGYG000002148_11_53
Type: CAZyme
Location: 67316 - 69313 (+)
Type: CAZyme
Location: 67316 - 69313 (+)
Gene ID: MGYG000002148_11_54
Type: pfam
Location: 69405 - 71015 (+)
Type: pfam
Location: 69405 - 71015 (+)
Gene ID: MGYG000002148_11_55
Type: CAZyme
Location: 71307 - 73298 (+)
Type: CAZyme
Location: 71307 - 73298 (+)
Gene ID: MGYG000002148_11_56
Type: pfam
Location: 73362 - 75083 (+)
Type: pfam
Location: 73362 - 75083 (+)
Gene ID: MGYG000002148_11_57
Type: CAZyme
Location: 75277 - 76626 (+)
Type: CAZyme
Location: 75277 - 76626 (+)
Gene ID: MGYG000002148_11_58
Type: CAZyme
Location: 76667 - 77623 (+)
Type: CAZyme
Location: 76667 - 77623 (+)
Gene ID: MGYG000002148_11_59
Type: TC
Location: 77690 - 79108 (+)
Type: TC
Location: 77690 - 79108 (+)
Gene ID: MGYG000002148_11_60
Type: pfam
Location: 79167 - 80270 (+)
Type: pfam
Location: 79167 - 80270 (+)
Gene ID: MGYG000002148_11_61
Type: CAZyme
Location: 80414 - 81337 (+)
Type: CAZyme
Location: 80414 - 81337 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.