Cluster: MGYG000002148_CGC41
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000002148
- CGC Family ID: CGCFAM_01923
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002148_11 | MGYG000002148_11_5 | 4155 | 5672 | + | 9.B.142.3.8 |
| NULL(UNKNOWN) | MGYG000002148_11 | MGYG000002148_11_6 | 5730 | 7979 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002148_11 | MGYG000002148_11_7 | 8164 | 10083 | + | GT26 | GT4 |
| NULL(UNKNOWN) | MGYG000002148_11 | MGYG000002148_11_8 | 10080 | 11720 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002148_11 | MGYG000002148_11_9 | 11698 | 12897 | + | GT4 |
| pfam | MGYG000002148_11 | MGYG000002148_11_10 | 12991 | 14010 | + | Radical_SAM | SPASM |
| TC | MGYG000002148_11 | MGYG000002148_11_11 | 14007 | 15749 | + | 9.B.142.3.8 |
| CAZyme | MGYG000002148_11 | MGYG000002148_11_12 | 15774 | 16643 | + | GT101 |
| TC | MGYG000002148_11 | MGYG000002148_11_13 | 16654 | 18423 | + | 3.A.1.106.15 |
| CAZyme | MGYG000002148_11 | MGYG000002148_11_14 | 18420 | 19478 | + | GT4 |
| CAZyme | MGYG000002148_11 | MGYG000002148_11_15 | 19500 | 20645 | + | GT4 |
Gene ID: MGYG000002148_11_5
Type: TC
Location: 4155 - 5672 (+)
Type: TC
Location: 4155 - 5672 (+)
Gene ID: MGYG000002148_11_6
Type:
Location: 5730 - 7979 (-)
Type:
Location: 5730 - 7979 (-)
Gene ID: MGYG000002148_11_7
Type: CAZyme
Location: 8164 - 10083 (+)
Type: CAZyme
Location: 8164 - 10083 (+)
Gene ID: MGYG000002148_11_8
Type:
Location: 10080 - 11720 (+)
Type:
Location: 10080 - 11720 (+)
Gene ID: MGYG000002148_11_9
Type: CAZyme
Location: 11698 - 12897 (+)
Type: CAZyme
Location: 11698 - 12897 (+)
Gene ID: MGYG000002148_11_10
Type: pfam
Location: 12991 - 14010 (+)
Type: pfam
Location: 12991 - 14010 (+)
Gene ID: MGYG000002148_11_11
Type: TC
Location: 14007 - 15749 (+)
Type: TC
Location: 14007 - 15749 (+)
Gene ID: MGYG000002148_11_12
Type: CAZyme
Location: 15774 - 16643 (+)
Type: CAZyme
Location: 15774 - 16643 (+)
Gene ID: MGYG000002148_11_13
Type: TC
Location: 16654 - 18423 (+)
Type: TC
Location: 16654 - 18423 (+)
Gene ID: MGYG000002148_11_14
Type: CAZyme
Location: 18420 - 19478 (+)
Type: CAZyme
Location: 18420 - 19478 (+)
Gene ID: MGYG000002148_11_15
Type: CAZyme
Location: 19500 - 20645 (+)
Type: CAZyme
Location: 19500 - 20645 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.