Cluster: MGYG000002148_CGC4
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000002148
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002148_1 | MGYG000002148_1_179 | 202540 | 204963 | + | GH146 |
| TC | MGYG000002148_1 | MGYG000002148_1_180 | 204989 | 206410 | + | 3.A.1.2.19 |
| TC | MGYG000002148_1 | MGYG000002148_1_181 | 206394 | 207371 | + | 3.A.1.2.20 |
| STP | MGYG000002148_1 | MGYG000002148_1_182 | 207385 | 208410 | + | Peripla_BP_1 |
| TF | MGYG000002148_1 | MGYG000002148_1_183 | 208757 | 209815 | + | LacI |
| CAZyme | MGYG000002148_1 | MGYG000002148_1_184 | 210157 | 211122 | + | GH26 |
| TC | MGYG000002148_1 | MGYG000002148_1_185 | 211169 | 212077 | + | 3.A.1.1.29 |
| TC | MGYG000002148_1 | MGYG000002148_1_186 | 212091 | 212984 | + | 3.A.1.1.29 |
| TC | MGYG000002148_1 | MGYG000002148_1_187 | 213029 | 214711 | + | 3.A.1.1.29 |
| CAZyme | MGYG000002148_1 | MGYG000002148_1_188 | 214802 | 217276 | + | GH2 |
| sulfatase | MGYG000002148_1 | MGYG000002148_1_189 | 217459 | 218988 | + | S1_43 |
| TC | MGYG000002148_1 | MGYG000002148_1_190 | 219141 | 220667 | + | 2.A.68.1.2 |
Gene ID: MGYG000002148_1_179
Type: CAZyme
Location: 202540 - 204963 (+)
Type: CAZyme
Location: 202540 - 204963 (+)
Gene ID: MGYG000002148_1_180
Type: TC
Location: 204989 - 206410 (+)
Type: TC
Location: 204989 - 206410 (+)
Gene ID: MGYG000002148_1_181
Type: TC
Location: 206394 - 207371 (+)
Type: TC
Location: 206394 - 207371 (+)
Gene ID: MGYG000002148_1_182
Type: STP
Location: 207385 - 208410 (+)
Type: STP
Location: 207385 - 208410 (+)
Gene ID: MGYG000002148_1_183
Type: TF
Location: 208757 - 209815 (+)
Type: TF
Location: 208757 - 209815 (+)
Gene ID: MGYG000002148_1_184
Type: CAZyme
Location: 210157 - 211122 (+)
Type: CAZyme
Location: 210157 - 211122 (+)
Gene ID: MGYG000002148_1_185
Type: TC
Location: 211169 - 212077 (+)
Type: TC
Location: 211169 - 212077 (+)
Gene ID: MGYG000002148_1_186
Type: TC
Location: 212091 - 212984 (+)
Type: TC
Location: 212091 - 212984 (+)
Gene ID: MGYG000002148_1_187
Type: TC
Location: 213029 - 214711 (+)
Type: TC
Location: 213029 - 214711 (+)
Gene ID: MGYG000002148_1_188
Type: CAZyme
Location: 214802 - 217276 (+)
Type: CAZyme
Location: 214802 - 217276 (+)
Gene ID: MGYG000002148_1_189
Type: sulfatase
Location: 217459 - 218988 (+)
Type: sulfatase
Location: 217459 - 218988 (+)
Gene ID: MGYG000002148_1_190
Type: TC
Location: 219141 - 220667 (+)
Type: TC
Location: 219141 - 220667 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.