Cluster: MGYG000002148_CGC21
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002148
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002148_3 | MGYG000002148_3_94 | 108982 | 110997 | - | 9.A.8.1.6 |
| STP | MGYG000002148_3 | MGYG000002148_3_95 | 111000 | 111227 | - | FeoA |
| TC | MGYG000002148_3 | MGYG000002148_3_96 | 111697 | 113319 | + | 2.A.35.2.1 |
| TC | MGYG000002148_3 | MGYG000002148_3_97 | 113545 | 115257 | - | 3.A.1.1.9 |
| CAZyme | MGYG000002148_3 | MGYG000002148_3_98 | 115274 | 116824 | - | GH13_36 |
| TC | MGYG000002148_3 | MGYG000002148_3_99 | 116956 | 117828 | - | 3.A.1.1.27 |
| TC | MGYG000002148_3 | MGYG000002148_3_100 | 117825 | 119222 | - | 3.A.1.1.27 |
| STP | MGYG000002148_3 | MGYG000002148_3_101 | 119340 | 120677 | - | SBP_bac_1 |
| NULL(UNKNOWN) | MGYG000002148_3 | MGYG000002148_3_102 | 120779 | 120976 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002148_3 | MGYG000002148_3_103 | 121004 | 122725 | - | 8.A.59.2.1 |
| TF | MGYG000002148_3 | MGYG000002148_3_104 | 122718 | 124256 | - | HTH_AraC | HTH_AraC |
| pfam | MGYG000002148_3 | MGYG000002148_3_105 | 124271 | 125014 | - | Hydrolase | Hydrolase_like | HAD_2 |
| TC | MGYG000002148_3 | MGYG000002148_3_106 | 125065 | 126477 | - | 9.A.11.1.1 |
Gene ID: MGYG000002148_3_94
Type: TC
Location: 108982 - 110997 (-)
Type: TC
Location: 108982 - 110997 (-)
Gene ID: MGYG000002148_3_95
Type: STP
Location: 111000 - 111227 (-)
Type: STP
Location: 111000 - 111227 (-)
Gene ID: MGYG000002148_3_96
Type: TC
Location: 111697 - 113319 (+)
Type: TC
Location: 111697 - 113319 (+)
Gene ID: MGYG000002148_3_97
Type: TC
Location: 113545 - 115257 (-)
Type: TC
Location: 113545 - 115257 (-)
Gene ID: MGYG000002148_3_98
Type: CAZyme
Location: 115274 - 116824 (-)
Type: CAZyme
Location: 115274 - 116824 (-)
Gene ID: MGYG000002148_3_99
Type: TC
Location: 116956 - 117828 (-)
Type: TC
Location: 116956 - 117828 (-)
Gene ID: MGYG000002148_3_100
Type: TC
Location: 117825 - 119222 (-)
Type: TC
Location: 117825 - 119222 (-)
Gene ID: MGYG000002148_3_101
Type: STP
Location: 119340 - 120677 (-)
Type: STP
Location: 119340 - 120677 (-)
Gene ID: MGYG000002148_3_102
Type:
Location: 120779 - 120976 (-)
Type:
Location: 120779 - 120976 (-)
Gene ID: MGYG000002148_3_103
Type: TC
Location: 121004 - 122725 (-)
Type: TC
Location: 121004 - 122725 (-)
Gene ID: MGYG000002148_3_104
Type: TF
Location: 122718 - 124256 (-)
Type: TF
Location: 122718 - 124256 (-)
Gene ID: MGYG000002148_3_105
Type: pfam
Location: 124271 - 125014 (-)
Type: pfam
Location: 124271 - 125014 (-)
Gene ID: MGYG000002148_3_106
Type: TC
Location: 125065 - 126477 (-)
Type: TC
Location: 125065 - 126477 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Gallintestinimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.