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Cluster: MGYG000002148_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002148_3 MGYG000002148_3_29 34523 35596 + 3.A.1.11.8
TC MGYG000002148_3 MGYG000002148_3_30 35589 36449 + 3.A.1.11.8
TC MGYG000002148_3 MGYG000002148_3_31 36446 37228 + 3.A.1.11.1
TC MGYG000002148_3 MGYG000002148_3_32 37245 38330 + 3.A.1.11.7
pfam MGYG000002148_3 MGYG000002148_3_33 38412 39308 + PseudoU_synth_2
CAZyme MGYG000002148_3 MGYG000002148_3_34 39340 41367 - GH127
TF MGYG000002148_3 MGYG000002148_3_35 41552 42385 + HTH_AraC
CAZyme MGYG000002148_3 MGYG000002148_3_36 42401 43705 - GH27
Gene ID: MGYG000002148_3_29
Type: TC
Location: 34523 - 35596 (+)
Gene ID: MGYG000002148_3_30
Type: TC
Location: 35589 - 36449 (+)
Gene ID: MGYG000002148_3_31
Type: TC
Location: 36446 - 37228 (+)
Gene ID: MGYG000002148_3_32
Type: TC
Location: 37245 - 38330 (+)
Gene ID: MGYG000002148_3_33
Type: pfam
Location: 38412 - 39308 (+)
Gene ID: MGYG000002148_3_34
Type: CAZyme
Location: 39340 - 41367 (-)
Gene ID: MGYG000002148_3_35
Type: TF
Location: 41552 - 42385 (+)
Gene ID: MGYG000002148_3_36
Type: CAZyme
Location: 42401 - 43705 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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