Cluster: MGYG000002145_CGC18
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002145
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002145_28 | MGYG000002145_28_27 | 24856 | 25284 | - | 3.A.1.125.3 |
| STP | MGYG000002145_28 | MGYG000002145_28_28 | 25241 | 25768 | - | Response_reg |
| TC | MGYG000002145_28 | MGYG000002145_28_29 | 25940 | 27151 | + | 1.A.1.24.5 |
| pfam | MGYG000002145_28 | MGYG000002145_28_30 | 27543 | 29009 | - | UbiD | UbiD_N | UbiD_C |
| CAZyme | MGYG000002145_28 | MGYG000002145_28_31 | 29195 | 30034 | + | CE4 |
| pfam | MGYG000002145_28 | MGYG000002145_28_32 | 30130 | 31440 | - | ThiC_Rad_SAM |
| NULL(UNKNOWN) | MGYG000002145_28 | MGYG000002145_28_33 | 31446 | 31577 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002145_28 | MGYG000002145_28_34 | 31685 | 32194 | - | 3.A.1.26.5 |
| TC | MGYG000002145_28 | MGYG000002145_28_35 | 32470 | 33189 | - | 1.A.62.2.1 |
| TC | MGYG000002145_28 | MGYG000002145_28_36 | 33205 | 33762 | - | 4.F.1.1.7 |
Gene ID: MGYG000002145_28_27
Type: TC
Location: 24856 - 25284 (-)
Type: TC
Location: 24856 - 25284 (-)
Gene ID: MGYG000002145_28_28
Type: STP
Location: 25241 - 25768 (-)
Type: STP
Location: 25241 - 25768 (-)
Gene ID: MGYG000002145_28_29
Type: TC
Location: 25940 - 27151 (+)
Type: TC
Location: 25940 - 27151 (+)
Gene ID: MGYG000002145_28_30
Type: pfam
Location: 27543 - 29009 (-)
Type: pfam
Location: 27543 - 29009 (-)
Gene ID: MGYG000002145_28_31
Type: CAZyme
Location: 29195 - 30034 (+)
Type: CAZyme
Location: 29195 - 30034 (+)
Gene ID: MGYG000002145_28_32
Type: pfam
Location: 30130 - 31440 (-)
Type: pfam
Location: 30130 - 31440 (-)
Gene ID: MGYG000002145_28_33
Type:
Location: 31446 - 31577 (-)
Type:
Location: 31446 - 31577 (-)
Gene ID: MGYG000002145_28_34
Type: TC
Location: 31685 - 32194 (-)
Type: TC
Location: 31685 - 32194 (-)
Gene ID: MGYG000002145_28_35
Type: TC
Location: 32470 - 33189 (-)
Type: TC
Location: 32470 - 33189 (-)
Gene ID: MGYG000002145_28_36
Type: TC
Location: 33205 - 33762 (-)
Type: TC
Location: 33205 - 33762 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_B
Species
Lachnoclostridium_B monacensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.