Cluster: MGYG000002143_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002143
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002143_43 | MGYG000002143_43_3 | 1396 | 2148 | + | CE4 |
| pfam | MGYG000002143_43 | MGYG000002143_43_4 | 2198 | 2440 | - | SecG |
| TF | MGYG000002143_43 | MGYG000002143_43_5 | 2651 | 3301 | + | LexA_DNA_bind |
| TC | MGYG000002143_43 | MGYG000002143_43_6 | 3556 | 5160 | - | 3.A.1.5.11 |
| pfam | MGYG000002143_43 | MGYG000002143_43_7 | 5157 | 5969 | - | Cu-oxidase_4 |
| TC | MGYG000002143_43 | MGYG000002143_43_8 | 6221 | 8965 | - | 3.A.5.1.3 |
Gene ID: MGYG000002143_43_3
Type: CAZyme
Location: 1396 - 2148 (+)
Type: CAZyme
Location: 1396 - 2148 (+)
Gene ID: MGYG000002143_43_4
Type: pfam
Location: 2198 - 2440 (-)
Type: pfam
Location: 2198 - 2440 (-)
Gene ID: MGYG000002143_43_5
Type: TF
Location: 2651 - 3301 (+)
Type: TF
Location: 2651 - 3301 (+)
Gene ID: MGYG000002143_43_6
Type: TC
Location: 3556 - 5160 (-)
Type: TC
Location: 3556 - 5160 (-)
Gene ID: MGYG000002143_43_7
Type: pfam
Location: 5157 - 5969 (-)
Type: pfam
Location: 5157 - 5969 (-)
Gene ID: MGYG000002143_43_8
Type: TC
Location: 6221 - 8965 (-)
Type: TC
Location: 6221 - 8965 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900545585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002143_43_6 | vegetarian > omnivore | 3.25123 | 0.00444 |