Cluster: MGYG000002143_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002143
- CGC Family ID: CGCFAM_01359
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002143_23 | MGYG000002143_23_6 | 5851 | 6768 | - | GH25 |
| pfam | MGYG000002143_23 | MGYG000002143_23_7 | 6774 | 7604 | - | Methyltransf_11 | Methyltransf_25 | Methyltransf_31 | Zn_ribbon_RlmA |
| TC | MGYG000002143_23 | MGYG000002143_23_8 | 7601 | 8995 | - | 2.A.66.1.46 |
Gene ID: MGYG000002143_23_6
Type: CAZyme
Location: 5851 - 6768 (-)
Type: CAZyme
Location: 5851 - 6768 (-)
Gene ID: MGYG000002143_23_7
Type: pfam
Location: 6774 - 7604 (-)
Type: pfam
Location: 6774 - 7604 (-)
Gene ID: MGYG000002143_23_8
Type: TC
Location: 7601 - 8995 (-)
Type: TC
Location: 7601 - 8995 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900545585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002143_23_6 | vegetarian > omnivore | 1.88459 | 0.00444 |