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Cluster: MGYG000002143_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002143_15 MGYG000002143_15_21 25187 26188 - GT2
CAZyme MGYG000002143_15 MGYG000002143_15_22 26185 27294 - GT4
TC MGYG000002143_15 MGYG000002143_15_23 27316 28062 - 3.A.1.103.1
pfam MGYG000002143_15 MGYG000002143_15_24 28073 28840 - ABC2_membrane
pfam MGYG000002143_15 MGYG000002143_15_25 29336 29758 + Flavodoxin_1
TC MGYG000002143_15 MGYG000002143_15_26 30210 31760 - 2.A.66.1.40
STP MGYG000002143_15 MGYG000002143_15_27 31781 32959 - Fer4 | Fer4
pfam MGYG000002143_15 MGYG000002143_15_28 32956 34053 - PS_pyruv_trans
CAZyme MGYG000002143_15 MGYG000002143_15_29 34050 34745 - GT32
CAZyme MGYG000002143_15 MGYG000002143_15_30 34749 35945 - GT4
CAZyme MGYG000002143_15 MGYG000002143_15_31 35942 36769 - GT2
pfam MGYG000002143_15 MGYG000002143_15_32 36844 37695 - Glycos_transf_2
pfam MGYG000002143_15 MGYG000002143_15_33 37891 39000 - EpsG
CAZyme MGYG000002143_15 MGYG000002143_15_34 39002 40087 - GT4
pfam MGYG000002143_15 MGYG000002143_15_35 40084 40743 - Hexapep | PglD_N
TC MGYG000002143_15 MGYG000002143_15_36 40760 41389 - 9.B.18.1.2
Gene ID: MGYG000002143_15_21
Type: CAZyme
Location: 25187 - 26188 (-)
Gene ID: MGYG000002143_15_22
Type: CAZyme
Location: 26185 - 27294 (-)
Gene ID: MGYG000002143_15_23
Type: TC
Location: 27316 - 28062 (-)
Gene ID: MGYG000002143_15_24
Type: pfam
Location: 28073 - 28840 (-)
Gene ID: MGYG000002143_15_25
Type: pfam
Location: 29336 - 29758 (+)
Gene ID: MGYG000002143_15_26
Type: TC
Location: 30210 - 31760 (-)
Gene ID: MGYG000002143_15_27
Type: STP
Location: 31781 - 32959 (-)
Gene ID: MGYG000002143_15_28
Type: pfam
Location: 32956 - 34053 (-)
Gene ID: MGYG000002143_15_29
Type: CAZyme
Location: 34050 - 34745 (-)
Gene ID: MGYG000002143_15_30
Type: CAZyme
Location: 34749 - 35945 (-)
Gene ID: MGYG000002143_15_31
Type: CAZyme
Location: 35942 - 36769 (-)
Gene ID: MGYG000002143_15_32
Type: pfam
Location: 36844 - 37695 (-)
Gene ID: MGYG000002143_15_33
Type: pfam
Location: 37891 - 39000 (-)
Gene ID: MGYG000002143_15_34
Type: CAZyme
Location: 39002 - 40087 (-)
Gene ID: MGYG000002143_15_35
Type: pfam
Location: 40084 - 40743 (-)
Gene ID: MGYG000002143_15_36
Type: TC
Location: 40760 - 41389 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002143_15_21 vegetarian > omnivore 2.59167 0.00444
MGYG000002143_15_22 vegetarian > omnivore 3.04915 0.00444
MGYG000002143_15_23 vegetarian > omnivore 1.14840 0.00444
MGYG000002143_15_24 vegetarian > omnivore 1.52640 0.00444
MGYG000002143_15_28 vegetarian > vegan 1.51170 0.01165
MGYG000002143_15_31 vegetarian > vegan 1.16345 0.01165
MGYG000002143_15_34 vegetarian > vegan 1.58455 0.01165
MGYG000002143_15_36 vegetarian > vegan 1.62662 0.01165

🧭 Explore Read Mapping of CGC

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