Cluster: MGYG000002143_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000002143
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002143_8 | MGYG000002143_8_12 | 10389 | 12281 | + | CBM48 | GH13_9 |
| pfam | MGYG000002143_8 | MGYG000002143_8_13 | 12278 | 13486 | + | NTP_transferase | Hexapep_GlmU |
| pfam | MGYG000002143_8 | MGYG000002143_8_14 | 13483 | 14595 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | MGYG000002143_8 | MGYG000002143_8_15 | 14622 | 16055 | + | GT5 |
| CAZyme | MGYG000002143_8 | MGYG000002143_8_16 | 16088 | 18505 | + | GT35 |
| TC | MGYG000002143_8 | MGYG000002143_8_17 | 18605 | 19768 | + | 3.A.18.1.1 |
Gene ID: MGYG000002143_8_12
Type: CAZyme
Location: 10389 - 12281 (+)
Type: CAZyme
Location: 10389 - 12281 (+)
Gene ID: MGYG000002143_8_13
Type: pfam
Location: 12278 - 13486 (+)
Type: pfam
Location: 12278 - 13486 (+)
Gene ID: MGYG000002143_8_14
Type: pfam
Location: 13483 - 14595 (+)
Type: pfam
Location: 13483 - 14595 (+)
Gene ID: MGYG000002143_8_15
Type: CAZyme
Location: 14622 - 16055 (+)
Type: CAZyme
Location: 14622 - 16055 (+)
Gene ID: MGYG000002143_8_16
Type: CAZyme
Location: 16088 - 18505 (+)
Type: CAZyme
Location: 16088 - 18505 (+)
Gene ID: MGYG000002143_8_17
Type: TC
Location: 18605 - 19768 (+)
Type: TC
Location: 18605 - 19768 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900545585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.