Cluster: MGYG000002143_CGC10
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002143
- CGC Family ID: CGCFAM_06173
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002143_46 | MGYG000002143_46_2 | 1408 | 3162 | - | 2.A.58.2.2 |
| pfam | MGYG000002143_46 | MGYG000002143_46_3 | 3359 | 3835 | + | Sm_multidrug_ex |
| pfam | MGYG000002143_46 | MGYG000002143_46_4 | 3893 | 4579 | - | RelA_SpoT |
| CAZyme | MGYG000002143_46 | MGYG000002143_46_5 | 4758 | 5885 | - | GT28 |
| pfam | MGYG000002143_46 | MGYG000002143_46_6 | 5860 | 6369 | - | CrtO |
| STP | MGYG000002143_46 | MGYG000002143_46_7 | 6366 | 6935 | - | TetR_N |
| TC | MGYG000002143_46 | MGYG000002143_46_8 | 7050 | 8156 | - | 9.A.23.1.1 |
| peptidase | MGYG000002143_46 | MGYG000002143_46_9 | 8201 | 8827 | - | C26.UPW |
| pfam | MGYG000002143_46 | MGYG000002143_46_10 | 9304 | 10329 | - | Phage_integrase | DUF1653 |
| TC | MGYG000002143_46 | MGYG000002143_46_11 | 10486 | 10695 | + | 2.A.22.5.2 |
Gene ID: MGYG000002143_46_2
Type: TC
Location: 1408 - 3162 (-)
Type: TC
Location: 1408 - 3162 (-)
Gene ID: MGYG000002143_46_3
Type: pfam
Location: 3359 - 3835 (+)
Type: pfam
Location: 3359 - 3835 (+)
Gene ID: MGYG000002143_46_4
Type: pfam
Location: 3893 - 4579 (-)
Type: pfam
Location: 3893 - 4579 (-)
Gene ID: MGYG000002143_46_5
Type: CAZyme
Location: 4758 - 5885 (-)
Type: CAZyme
Location: 4758 - 5885 (-)
Gene ID: MGYG000002143_46_6
Type: pfam
Location: 5860 - 6369 (-)
Type: pfam
Location: 5860 - 6369 (-)
Gene ID: MGYG000002143_46_7
Type: STP
Location: 6366 - 6935 (-)
Type: STP
Location: 6366 - 6935 (-)
Gene ID: MGYG000002143_46_8
Type: TC
Location: 7050 - 8156 (-)
Type: TC
Location: 7050 - 8156 (-)
Gene ID: MGYG000002143_46_9
Type: peptidase
Location: 8201 - 8827 (-)
Type: peptidase
Location: 8201 - 8827 (-)
Gene ID: MGYG000002143_46_10
Type: pfam
Location: 9304 - 10329 (-)
Type: pfam
Location: 9304 - 10329 (-)
Gene ID: MGYG000002143_46_11
Type: TC
Location: 10486 - 10695 (+)
Type: TC
Location: 10486 - 10695 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900545585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002143_46_5 | vegetarian > omnivore | 1.59982 | 0.00444 |
| MGYG000002143_46_6 | vegetarian > omnivore | 1.50568 | 0.00444 |
| MGYG000002143_46_7 | vegetarian > omnivore | 2.14545 | 0.00444 |
| MGYG000002143_46_9 | vegetarian > omnivore | 3.29521 | 0.00444 |
| MGYG000002143_46_10 | vegetarian > omnivore | 1.04696 | 0.00444 |