Cluster: MGYG000002143_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002143
- CGC Family ID: CGCFAM_02448
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002143_4 | MGYG000002143_4_24 | 27492 | 28832 | + | 2.A.38.4.3 |
| TC | MGYG000002143_4 | MGYG000002143_4_25 | 28845 | 29492 | + | 2.A.38.4.6 |
| pfam | MGYG000002143_4 | MGYG000002143_4_26 | 30001 | 31551 | + | Resolvase | Recombinase | Zn_ribbon_recom |
| NULL(UNKNOWN) | MGYG000002143_4 | MGYG000002143_4_27 | 31556 | 31696 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002143_4 | MGYG000002143_4_28 | 31960 | 32571 | + | CE4 |
Gene ID: MGYG000002143_4_24
Type: TC
Location: 27492 - 28832 (+)
Type: TC
Location: 27492 - 28832 (+)
Gene ID: MGYG000002143_4_25
Type: TC
Location: 28845 - 29492 (+)
Type: TC
Location: 28845 - 29492 (+)
Gene ID: MGYG000002143_4_26
Type: pfam
Location: 30001 - 31551 (+)
Type: pfam
Location: 30001 - 31551 (+)
Gene ID: MGYG000002143_4_27
Type:
Location: 31556 - 31696 (+)
Type:
Location: 31556 - 31696 (+)
Gene ID: MGYG000002143_4_28
Type: CAZyme
Location: 31960 - 32571 (+)
Type: CAZyme
Location: 31960 - 32571 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900545585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002143_4_26 | vegetarian > vegan | 1.20272 | 0.01165 |
| MGYG000002143_4_27 | vegetarian > omnivore | 2.31960 | 0.00444 |