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Cluster: MGYG000002142_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002142_1 MGYG000002142_1_46 58395 59564 - CE9
STP MGYG000002142_1 MGYG000002142_1_47 59682 60848 - SIS | SIS
TF MGYG000002142_1 MGYG000002142_1_48 60963 61694 - GntR
TC MGYG000002142_1 MGYG000002142_1_49 61879 62961 - 4.A.6.1.4
TC MGYG000002142_1 MGYG000002142_1_50 62951 63751 - 4.A.6.1.4
TC MGYG000002142_1 MGYG000002142_1_51 63842 64324 - 4.A.6.1.4
pfam MGYG000002142_1 MGYG000002142_1_52 64361 64642 - YajC
TC MGYG000002142_1 MGYG000002142_1_53 64642 65085 - 4.A.6.1.16
Gene ID: MGYG000002142_1_46
Type: CAZyme
Location: 58395 - 59564 (-)
Gene ID: MGYG000002142_1_47
Type: STP
Location: 59682 - 60848 (-)
Gene ID: MGYG000002142_1_48
Type: TF
Location: 60963 - 61694 (-)
Gene ID: MGYG000002142_1_49
Type: TC
Location: 61879 - 62961 (-)
Gene ID: MGYG000002142_1_50
Type: TC
Location: 62951 - 63751 (-)
Gene ID: MGYG000002142_1_51
Type: TC
Location: 63842 - 64324 (-)
Gene ID: MGYG000002142_1_52
Type: pfam
Location: 64361 - 64642 (-)
Gene ID: MGYG000002142_1_53
Type: TC
Location: 64642 - 65085 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002142_1_52 vegan > omnivore 1.02230 0.00701

🧭 Explore Read Mapping of CGC

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