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Cluster: MGYG000002140_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002140_25 MGYG000002140_25_15 14271 16253 + GH13_14
NULL(UNKNOWN) MGYG000002140_25 MGYG000002140_25_16 16268 16546 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000002140_25 MGYG000002140_25_17 16620 19244 - GT51
pfam MGYG000002140_25 MGYG000002140_25_18 19481 20137 + UPF0029 | DUF1949
TC MGYG000002140_25 MGYG000002140_25_19 20276 21607 + 1.A.26.1.2
TC MGYG000002140_25 MGYG000002140_25_20 21651 23024 + 2.A.66.1.32
NULL(UNKNOWN) MGYG000002140_25 MGYG000002140_25_21 23131 23970 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000002140_25 MGYG000002140_25_22 24109 25896 - 3.A.1.106.3
TC MGYG000002140_25 MGYG000002140_25_23 25877 27646 - 3.A.1.106.3
Gene ID: MGYG000002140_25_15
Type: CAZyme
Location: 14271 - 16253 (+)
Gene ID: MGYG000002140_25_16
Type:
Location: 16268 - 16546 (+)
Gene ID: MGYG000002140_25_17
Type: CAZyme
Location: 16620 - 19244 (-)
Gene ID: MGYG000002140_25_18
Type: pfam
Location: 19481 - 20137 (+)
Gene ID: MGYG000002140_25_19
Type: TC
Location: 20276 - 21607 (+)
Gene ID: MGYG000002140_25_20
Type: TC
Location: 21651 - 23024 (+)
Gene ID: MGYG000002140_25_21
Type:
Location: 23131 - 23970 (+)
Gene ID: MGYG000002140_25_22
Type: TC
Location: 24109 - 25896 (-)
Gene ID: MGYG000002140_25_23
Type: TC
Location: 25877 - 27646 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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