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Cluster: MGYG000002140_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002140_19 MGYG000002140_19_28 35138 36844 + CBM34 | GH13_20
TC MGYG000002140_19 MGYG000002140_19_29 36905 38353 + 3.A.1.1.26
TC MGYG000002140_19 MGYG000002140_19_30 38393 39700 + 3.A.1.1.27
TC MGYG000002140_19 MGYG000002140_19_31 39697 40533 + 3.A.1.1.27
NULL(UNKNOWN) MGYG000002140_19 MGYG000002140_19_32 40717 41256 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) MGYG000002140_19 MGYG000002140_19_33 41420 41641 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000002140_19 MGYG000002140_19_34 41938 43377 + 2.A.25.1.4
TC MGYG000002140_19 MGYG000002140_19_35 43424 44791 + 2.A.22.5.3
TC MGYG000002140_19 MGYG000002140_19_36 44988 46481 - 1.B.52.2.2
CAZyme MGYG000002140_19 MGYG000002140_19_37 46878 50021 + GH5_8
Gene ID: MGYG000002140_19_28
Type: CAZyme
Location: 35138 - 36844 (+)
Gene ID: MGYG000002140_19_29
Type: TC
Location: 36905 - 38353 (+)
Gene ID: MGYG000002140_19_30
Type: TC
Location: 38393 - 39700 (+)
Gene ID: MGYG000002140_19_31
Type: TC
Location: 39697 - 40533 (+)
Gene ID: MGYG000002140_19_32
Type:
Location: 40717 - 41256 (+)
Gene ID: MGYG000002140_19_33
Type:
Location: 41420 - 41641 (+)
Gene ID: MGYG000002140_19_34
Type: TC
Location: 41938 - 43377 (+)
Gene ID: MGYG000002140_19_35
Type: TC
Location: 43424 - 44791 (+)
Gene ID: MGYG000002140_19_36
Type: TC
Location: 44988 - 46481 (-)
Gene ID: MGYG000002140_19_37
Type: CAZyme
Location: 46878 - 50021 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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