Cluster: MGYG000002140_CGC29
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000002140
- CGC Family ID: CGCFAM_00888
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002140_8 | MGYG000002140_8_83 | 87530 | 89641 | + | 1.B.52.2.2 |
| CAZyme | MGYG000002140_8 | MGYG000002140_8_84 | 89816 | 90958 | + | GH8 |
| CAZyme | MGYG000002140_8 | MGYG000002140_8_85 | 91012 | 92910 | + | CE20 | CE20 |
| CAZyme | MGYG000002140_8 | MGYG000002140_8_86 | 92926 | 95808 | + | GH115 |
| TF | MGYG000002140_8 | MGYG000002140_8_87 | 95811 | 96530 | + | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000002140_8 | MGYG000002140_8_88 | 96558 | 98726 | + | GH3 |
| CAZyme | MGYG000002140_8 | MGYG000002140_8_89 | 98785 | 100782 | + | GH67 |
| CAZyme | MGYG000002140_8 | MGYG000002140_8_90 | 100924 | 104397 | + | GH2 |
| TC | MGYG000002140_8 | MGYG000002140_8_91 | 104647 | 105594 | + | 3.A.1.1.10 |
| TC | MGYG000002140_8 | MGYG000002140_8_92 | 105609 | 106526 | + | 3.A.1.1.29 |
Gene ID: MGYG000002140_8_83
Type: TC
Location: 87530 - 89641 (+)
Type: TC
Location: 87530 - 89641 (+)
Gene ID: MGYG000002140_8_84
Type: CAZyme
Location: 89816 - 90958 (+)
Type: CAZyme
Location: 89816 - 90958 (+)
Gene ID: MGYG000002140_8_85
Type: CAZyme
Location: 91012 - 92910 (+)
Type: CAZyme
Location: 91012 - 92910 (+)
Gene ID: MGYG000002140_8_86
Type: CAZyme
Location: 92926 - 95808 (+)
Type: CAZyme
Location: 92926 - 95808 (+)
Gene ID: MGYG000002140_8_87
Type: TF
Location: 95811 - 96530 (+)
Type: TF
Location: 95811 - 96530 (+)
Gene ID: MGYG000002140_8_88
Type: CAZyme
Location: 96558 - 98726 (+)
Type: CAZyme
Location: 96558 - 98726 (+)
Gene ID: MGYG000002140_8_89
Type: CAZyme
Location: 98785 - 100782 (+)
Type: CAZyme
Location: 98785 - 100782 (+)
Gene ID: MGYG000002140_8_90
Type: CAZyme
Location: 100924 - 104397 (+)
Type: CAZyme
Location: 100924 - 104397 (+)
Gene ID: MGYG000002140_8_91
Type: TC
Location: 104647 - 105594 (+)
Type: TC
Location: 104647 - 105594 (+)
Gene ID: MGYG000002140_8_92
Type: TC
Location: 105609 - 106526 (+)
Type: TC
Location: 105609 - 106526 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-510
Species
CAG-510 sp900551115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.