Cluster: MGYG000002140_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002140
- CGC Family ID: CGCFAM_00353
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002140_4 | MGYG000002140_4_89 | 104894 | 106702 | - | 8.A.59.2.1 |
| STP | MGYG000002140_4 | MGYG000002140_4_90 | 106994 | 108343 | + | SBP_bac_1 |
| TC | MGYG000002140_4 | MGYG000002140_4_91 | 108417 | 109460 | + | 3.A.1.1.23 |
| TC | MGYG000002140_4 | MGYG000002140_4_92 | 109475 | 110320 | + | 3.A.1.1.11 |
| CAZyme | MGYG000002140_4 | MGYG000002140_4_93 | 110344 | 111564 | + | GH88 |
Gene ID: MGYG000002140_4_89
Type: TC
Location: 104894 - 106702 (-)
Type: TC
Location: 104894 - 106702 (-)
Gene ID: MGYG000002140_4_90
Type: STP
Location: 106994 - 108343 (+)
Type: STP
Location: 106994 - 108343 (+)
Gene ID: MGYG000002140_4_91
Type: TC
Location: 108417 - 109460 (+)
Type: TC
Location: 108417 - 109460 (+)
Gene ID: MGYG000002140_4_92
Type: TC
Location: 109475 - 110320 (+)
Type: TC
Location: 109475 - 110320 (+)
Gene ID: MGYG000002140_4_93
Type: CAZyme
Location: 110344 - 111564 (+)
Type: CAZyme
Location: 110344 - 111564 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-510
Species
CAG-510 sp900551115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002140_4_92 | vegetarian > omnivore | 2.00181 | 0.02445 |
| MGYG000002140_4_92 | vegetarian > vegan | 1.44626 | 0.00364 |