Cluster: MGYG000002140_CGC2
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000002140
- CGC Family ID: CGCFAM_00005
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002140_1 | MGYG000002140_1_76 | 76114 | 76869 | + | GT2 |
| TC | MGYG000002140_1 | MGYG000002140_1_77 | 76977 | 78428 | + | 9.B.18.1.3 |
| NULL(UNKNOWN) | MGYG000002140_1 | MGYG000002140_1_78 | 78431 | 79534 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002140_1 | MGYG000002140_1_79 | 79542 | 80327 | + | GT2 |
| pfam | MGYG000002140_1 | MGYG000002140_1_80 | 80324 | 81406 | + | EpsG |
| CAZyme | MGYG000002140_1 | MGYG000002140_1_81 | 81494 | 82306 | + | GT2 |
| CAZyme | MGYG000002140_1 | MGYG000002140_1_82 | 82303 | 83580 | + | GT4 |
| NULL(UNKNOWN) | MGYG000002140_1 | MGYG000002140_1_83 | 83604 | 85202 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002140_1 | MGYG000002140_1_84 | 85204 | 86463 | + | GT4 |
| CAZyme | MGYG000002140_1 | MGYG000002140_1_85 | 86403 | 87485 | + | GT2 |
| TC | MGYG000002140_1 | MGYG000002140_1_86 | 87537 | 89051 | + | 4.C.1.1.7 |
Gene ID: MGYG000002140_1_76
Type: CAZyme
Location: 76114 - 76869 (+)
Type: CAZyme
Location: 76114 - 76869 (+)
Gene ID: MGYG000002140_1_77
Type: TC
Location: 76977 - 78428 (+)
Type: TC
Location: 76977 - 78428 (+)
Gene ID: MGYG000002140_1_78
Type:
Location: 78431 - 79534 (+)
Type:
Location: 78431 - 79534 (+)
Gene ID: MGYG000002140_1_79
Type: CAZyme
Location: 79542 - 80327 (+)
Type: CAZyme
Location: 79542 - 80327 (+)
Gene ID: MGYG000002140_1_80
Type: pfam
Location: 80324 - 81406 (+)
Type: pfam
Location: 80324 - 81406 (+)
Gene ID: MGYG000002140_1_81
Type: CAZyme
Location: 81494 - 82306 (+)
Type: CAZyme
Location: 81494 - 82306 (+)
Gene ID: MGYG000002140_1_82
Type: CAZyme
Location: 82303 - 83580 (+)
Type: CAZyme
Location: 82303 - 83580 (+)
Gene ID: MGYG000002140_1_83
Type:
Location: 83604 - 85202 (+)
Type:
Location: 83604 - 85202 (+)
Gene ID: MGYG000002140_1_84
Type: CAZyme
Location: 85204 - 86463 (+)
Type: CAZyme
Location: 85204 - 86463 (+)
Gene ID: MGYG000002140_1_85
Type: CAZyme
Location: 86403 - 87485 (+)
Type: CAZyme
Location: 86403 - 87485 (+)
Gene ID: MGYG000002140_1_86
Type: TC
Location: 87537 - 89051 (+)
Type: TC
Location: 87537 - 89051 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-510
Species
CAG-510 sp900551115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.