Cluster: MGYG000002139_CGC3
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000002139
- CGC Family ID: CGCFAM_00018
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002139_2 | MGYG000002139_2_161 | 159210 | 159947 | - | 3.A.1.103.1 |
| pfam | MGYG000002139_2 | MGYG000002139_2_162 | 159963 | 160775 | - | ABC2_membrane |
| pfam | MGYG000002139_2 | MGYG000002139_2_163 | 160973 | 161983 | + | Acyl_transf_3 |
| CAZyme | MGYG000002139_2 | MGYG000002139_2_164 | 162002 | 163588 | - | GT2 |
| CAZyme | MGYG000002139_2 | MGYG000002139_2_165 | 163598 | 165172 | - | GT4 |
| CAZyme | MGYG000002139_2 | MGYG000002139_2_166 | 165165 | 166220 | - | GT2 |
| pfam | MGYG000002139_2 | MGYG000002139_2_167 | 166257 | 167378 | - | Epimerase_2 |
| pfam | MGYG000002139_2 | MGYG000002139_2_168 | 167412 | 168509 | - | Epimerase | Polysacc_synt_C |
| TC | MGYG000002139_2 | MGYG000002139_2_169 | 168517 | 169524 | - | 9.B.18.2.1 |
| CAZyme | MGYG000002139_2 | MGYG000002139_2_170 | 169688 | 170671 | - | GT2 |
| CAZyme | MGYG000002139_2 | MGYG000002139_2_171 | 170674 | 171618 | - | GT2 |
| CAZyme | MGYG000002139_2 | MGYG000002139_2_172 | 171627 | 172553 | - | GT2 |
| CAZyme | MGYG000002139_2 | MGYG000002139_2_173 | 172553 | 174868 | - | GT4 |
Gene ID: MGYG000002139_2_161
Type: TC
Location: 159210 - 159947 (-)
Type: TC
Location: 159210 - 159947 (-)
Gene ID: MGYG000002139_2_162
Type: pfam
Location: 159963 - 160775 (-)
Type: pfam
Location: 159963 - 160775 (-)
Gene ID: MGYG000002139_2_163
Type: pfam
Location: 160973 - 161983 (+)
Type: pfam
Location: 160973 - 161983 (+)
Gene ID: MGYG000002139_2_164
Type: CAZyme
Location: 162002 - 163588 (-)
Type: CAZyme
Location: 162002 - 163588 (-)
Gene ID: MGYG000002139_2_165
Type: CAZyme
Location: 163598 - 165172 (-)
Type: CAZyme
Location: 163598 - 165172 (-)
Gene ID: MGYG000002139_2_166
Type: CAZyme
Location: 165165 - 166220 (-)
Type: CAZyme
Location: 165165 - 166220 (-)
Gene ID: MGYG000002139_2_167
Type: pfam
Location: 166257 - 167378 (-)
Type: pfam
Location: 166257 - 167378 (-)
Gene ID: MGYG000002139_2_168
Type: pfam
Location: 167412 - 168509 (-)
Type: pfam
Location: 167412 - 168509 (-)
Gene ID: MGYG000002139_2_169
Type: TC
Location: 168517 - 169524 (-)
Type: TC
Location: 168517 - 169524 (-)
Gene ID: MGYG000002139_2_170
Type: CAZyme
Location: 169688 - 170671 (-)
Type: CAZyme
Location: 169688 - 170671 (-)
Gene ID: MGYG000002139_2_171
Type: CAZyme
Location: 170674 - 171618 (-)
Type: CAZyme
Location: 170674 - 171618 (-)
Gene ID: MGYG000002139_2_172
Type: CAZyme
Location: 171627 - 172553 (-)
Type: CAZyme
Location: 171627 - 172553 (-)
Gene ID: MGYG000002139_2_173
Type: CAZyme
Location: 172553 - 174868 (-)
Type: CAZyme
Location: 172553 - 174868 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
JAEDES01
Species
JAEDES01 sp900552495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.