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Cluster: MGYG000002136_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002136_20 MGYG000002136_20_34 40764 42224 + 2.A.35.1.1
pfam MGYG000002136_20 MGYG000002136_20_35 42221 43597 + Na_H_antiporter
TC MGYG000002136_20 MGYG000002136_20_36 43582 44370 + 2.A.102.4.4
TF MGYG000002136_20 MGYG000002136_20_37 44536 45261 + GntR
TC MGYG000002136_20 MGYG000002136_20_38 45513 46835 + 3.D.6.1.2
TC MGYG000002136_20 MGYG000002136_20_39 46851 47792 + 3.D.6.1.2
TC MGYG000002136_20 MGYG000002136_20_40 47789 48394 + 3.D.6.1.2
TC MGYG000002136_20 MGYG000002136_20_41 48408 49103 + 3.D.6.1.2
TC MGYG000002136_20 MGYG000002136_20_42 49103 49678 + 3.D.6.1.2
TC MGYG000002136_20 MGYG000002136_20_43 49694 50485 + 3.D.6.1.2
NULL(UNKNOWN) MGYG000002136_20 MGYG000002136_20_44 50767 51639 + NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000002136_20 MGYG000002136_20_45 51783 53150 + AAA_14 | DUF4143
TC MGYG000002136_20 MGYG000002136_20_46 53126 54529 - 2.A.66.1.25
TF MGYG000002136_20 MGYG000002136_20_47 54551 55396 - HTH_AraC | HTH_AraC
CAZyme MGYG000002136_20 MGYG000002136_20_48 55587 58088 + GH31_2
TC MGYG000002136_20 MGYG000002136_20_49 58104 59123 + 2.A.56.1.2
pfam MGYG000002136_20 MGYG000002136_20_50 59138 59641 + DctQ
TC MGYG000002136_20 MGYG000002136_20_51 59638 60939 + 2.A.56.1.5
Gene ID: MGYG000002136_20_34
Type: TC
Location: 40764 - 42224 (+)
Gene ID: MGYG000002136_20_35
Type: pfam
Location: 42221 - 43597 (+)
Gene ID: MGYG000002136_20_36
Type: TC
Location: 43582 - 44370 (+)
Gene ID: MGYG000002136_20_37
Type: TF
Location: 44536 - 45261 (+)
Gene ID: MGYG000002136_20_38
Type: TC
Location: 45513 - 46835 (+)
Gene ID: MGYG000002136_20_39
Type: TC
Location: 46851 - 47792 (+)
Gene ID: MGYG000002136_20_40
Type: TC
Location: 47789 - 48394 (+)
Gene ID: MGYG000002136_20_41
Type: TC
Location: 48408 - 49103 (+)
Gene ID: MGYG000002136_20_42
Type: TC
Location: 49103 - 49678 (+)
Gene ID: MGYG000002136_20_43
Type: TC
Location: 49694 - 50485 (+)
Gene ID: MGYG000002136_20_44
Type:
Location: 50767 - 51639 (+)
Gene ID: MGYG000002136_20_45
Type: pfam
Location: 51783 - 53150 (+)
Gene ID: MGYG000002136_20_46
Type: TC
Location: 53126 - 54529 (-)
Gene ID: MGYG000002136_20_47
Type: TF
Location: 54551 - 55396 (-)
Gene ID: MGYG000002136_20_48
Type: CAZyme
Location: 55587 - 58088 (+)
Gene ID: MGYG000002136_20_49
Type: TC
Location: 58104 - 59123 (+)
Gene ID: MGYG000002136_20_50
Type: pfam
Location: 59138 - 59641 (+)
Gene ID: MGYG000002136_20_51
Type: TC
Location: 59638 - 60939 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002136_20_45 vegetarian > vegan 1.15459 0.02695

🧭 Explore Read Mapping of CGC

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