Cluster: MGYG000002130_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: host glycan/beta-glucan
- Genome ID: MGYG000002130
- CGC Family ID: CGCFAM_00012
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002130_3 | MGYG000002130_3_7 | 7302 | 8675 | - | 9.A.40.2.1 |
| TC | MGYG000002130_3 | MGYG000002130_3_8 | 8782 | 9465 | - | 1.C.113.1.10 |
| CAZyme | MGYG000002130_3 | MGYG000002130_3_9 | 10297 | 11715 | - | GH1 |
| CAZyme | MGYG000002130_3 | MGYG000002130_3_10 | 11712 | 13226 | - | GH1 |
| TC | MGYG000002130_3 | MGYG000002130_3_11 | 13229 | 14563 | - | 4.A.3.2.9 |
| TC | MGYG000002130_3 | MGYG000002130_3_12 | 14638 | 14946 | - | 4.A.3.2.2 |
Gene ID: MGYG000002130_3_7
Type: TC
Location: 7302 - 8675 (-)
Type: TC
Location: 7302 - 8675 (-)
Gene ID: MGYG000002130_3_8
Type: TC
Location: 8782 - 9465 (-)
Type: TC
Location: 8782 - 9465 (-)
Gene ID: MGYG000002130_3_9
Type: CAZyme
Location: 10297 - 11715 (-)
Type: CAZyme
Location: 10297 - 11715 (-)
Gene ID: MGYG000002130_3_10
Type: CAZyme
Location: 11712 - 13226 (-)
Type: CAZyme
Location: 11712 - 13226 (-)
Gene ID: MGYG000002130_3_11
Type: TC
Location: 13229 - 14563 (-)
Type: TC
Location: 13229 - 14563 (-)
Gene ID: MGYG000002130_3_12
Type: TC
Location: 14638 - 14946 (-)
Type: TC
Location: 14638 - 14946 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900763515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.