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Cluster: MGYG000002117_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002117_4 MGYG000002117_4_5 3991 5454 + 2.A.3.2.3
TC MGYG000002117_4 MGYG000002117_4_6 6094 8454 + 9.A.8.1.6
TC MGYG000002117_4 MGYG000002117_4_7 8769 10433 + 4.A.1.1.3
TF MGYG000002117_4 MGYG000002117_4_8 10496 11248 - HTH_6
CAZyme MGYG000002117_4 MGYG000002117_4_9 11423 12796 + GH4
NULL(UNKNOWN) MGYG000002117_4 MGYG000002117_4_10 12962 13714 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000002117_4 MGYG000002117_4_11 13890 15086 + 2.A.1.2.18
CAZyme MGYG000002117_4 MGYG000002117_4_12 15240 16616 + GH13_20
Gene ID: MGYG000002117_4_5
Type: TC
Location: 3991 - 5454 (+)
Gene ID: MGYG000002117_4_6
Type: TC
Location: 6094 - 8454 (+)
Gene ID: MGYG000002117_4_7
Type: TC
Location: 8769 - 10433 (+)
Gene ID: MGYG000002117_4_8
Type: TF
Location: 10496 - 11248 (-)
Gene ID: MGYG000002117_4_9
Type: CAZyme
Location: 11423 - 12796 (+)
Gene ID: MGYG000002117_4_10
Type:
Location: 12962 - 13714 (+)
Gene ID: MGYG000002117_4_11
Type: TC
Location: 13890 - 15086 (+)
Gene ID: MGYG000002117_4_12
Type: CAZyme
Location: 15240 - 16616 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002117_4_5 vegan > omnivore 1.36472 0.01144
MGYG000002117_4_9 vegan > omnivore 1.44344 0.01144
MGYG000002117_4_10 vegan > omnivore 1.60624 0.01144

🧭 Explore Read Mapping of CGC

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