Cluster: MGYG000002111_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002111
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002111_11 | MGYG000002111_11_29 | 37939 | 40947 | + | GH2 |
| NULL(UNKNOWN) | MGYG000002111_11 | MGYG000002111_11_30 | 40951 | 41406 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002111_11 | MGYG000002111_11_31 | 41560 | 43023 | + | 2.A.3.7.4 |
| STP | MGYG000002111_11 | MGYG000002111_11_32 | 43445 | 43693 | + | PTS-HPr |
| STP | MGYG000002111_11 | MGYG000002111_11_33 | 43882 | 44124 | + | FeoA |
| TC | MGYG000002111_11 | MGYG000002111_11_34 | 44165 | 44386 | + | 9.A.8.1.6 |
| TC | MGYG000002111_11 | MGYG000002111_11_35 | 44510 | 46837 | + | 9.A.8.1.6 |
Gene ID: MGYG000002111_11_29
Type: CAZyme
Location: 37939 - 40947 (+)
Type: CAZyme
Location: 37939 - 40947 (+)
Gene ID: MGYG000002111_11_30
Type:
Location: 40951 - 41406 (+)
Type:
Location: 40951 - 41406 (+)
Gene ID: MGYG000002111_11_31
Type: TC
Location: 41560 - 43023 (+)
Type: TC
Location: 41560 - 43023 (+)
Gene ID: MGYG000002111_11_32
Type: STP
Location: 43445 - 43693 (+)
Type: STP
Location: 43445 - 43693 (+)
Gene ID: MGYG000002111_11_33
Type: STP
Location: 43882 - 44124 (+)
Type: STP
Location: 43882 - 44124 (+)
Gene ID: MGYG000002111_11_34
Type: TC
Location: 44165 - 44386 (+)
Type: TC
Location: 44165 - 44386 (+)
Gene ID: MGYG000002111_11_35
Type: TC
Location: 44510 - 46837 (+)
Type: TC
Location: 44510 - 46837 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900541015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.