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Cluster: MGYG000002110_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002110_75 MGYG000002110_75_3 1786 2955 - CE9
STP MGYG000002110_75 MGYG000002110_75_4 3073 4239 - SIS | SIS
TF MGYG000002110_75 MGYG000002110_75_5 4354 5085 - GntR
TC MGYG000002110_75 MGYG000002110_75_6 5271 6353 - 4.A.6.1.4
TC MGYG000002110_75 MGYG000002110_75_7 6343 7143 - 4.A.6.1.4
TC MGYG000002110_75 MGYG000002110_75_8 7234 7716 - 4.A.6.1.4
pfam MGYG000002110_75 MGYG000002110_75_9 7753 8034 - YajC
TC MGYG000002110_75 MGYG000002110_75_10 8034 8477 - 4.A.6.1.16
Gene ID: MGYG000002110_75_3
Type: CAZyme
Location: 1786 - 2955 (-)
Gene ID: MGYG000002110_75_4
Type: STP
Location: 3073 - 4239 (-)
Gene ID: MGYG000002110_75_5
Type: TF
Location: 4354 - 5085 (-)
Gene ID: MGYG000002110_75_6
Type: TC
Location: 5271 - 6353 (-)
Gene ID: MGYG000002110_75_7
Type: TC
Location: 6343 - 7143 (-)
Gene ID: MGYG000002110_75_8
Type: TC
Location: 7234 - 7716 (-)
Gene ID: MGYG000002110_75_9
Type: pfam
Location: 7753 - 8034 (-)
Gene ID: MGYG000002110_75_10
Type: TC
Location: 8034 - 8477 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002110_75_9 vegan > omnivore 1.00650 0.00701

🧭 Explore Read Mapping of CGC

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