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Cluster: MGYG000002107_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002107_6 MGYG000002107_6_3 1925 2851 - CE7
TC MGYG000002107_6 MGYG000002107_6_4 2983 3810 - 3.A.1.5.27
TC MGYG000002107_6 MGYG000002107_6_5 3811 5826 - 3.A.1.5.25
TC MGYG000002107_6 MGYG000002107_6_6 5830 6786 - 3.A.1.5.38
TC MGYG000002107_6 MGYG000002107_6_7 6942 8555 - 3.A.1.5.27
pfam MGYG000002107_6 MGYG000002107_6_8 9092 10861 - GIY-YIG | UVR | UvrC_RNaseH_dom | UvrC_RNaseH
TC MGYG000002107_6 MGYG000002107_6_9 10868 13171 - 2.A.66.4.4
pfam MGYG000002107_6 MGYG000002107_6_10 13175 13675 - tRNA_edit
pfam MGYG000002107_6 MGYG000002107_6_11 13809 16688 - UvrA_DNA-bind | UvrA_inter
TC MGYG000002107_6 MGYG000002107_6_12 16949 17779 + 3.A.1.132.3
Gene ID: MGYG000002107_6_3
Type: CAZyme
Location: 1925 - 2851 (-)
Gene ID: MGYG000002107_6_4
Type: TC
Location: 2983 - 3810 (-)
Gene ID: MGYG000002107_6_5
Type: TC
Location: 3811 - 5826 (-)
Gene ID: MGYG000002107_6_6
Type: TC
Location: 5830 - 6786 (-)
Gene ID: MGYG000002107_6_7
Type: TC
Location: 6942 - 8555 (-)
Gene ID: MGYG000002107_6_8
Type: pfam
Location: 9092 - 10861 (-)
Gene ID: MGYG000002107_6_9
Type: TC
Location: 10868 - 13171 (-)
Gene ID: MGYG000002107_6_10
Type: pfam
Location: 13175 - 13675 (-)
Gene ID: MGYG000002107_6_11
Type: pfam
Location: 13809 - 16688 (-)
Gene ID: MGYG000002107_6_12
Type: TC
Location: 16949 - 17779 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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