Cluster: MGYG000002104_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002104
- CGC Family ID: CGCFAM_00013
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002104_1 | MGYG000002104_1_122 | 131883 | 132911 | + | 9.B.146.1.6 |
| pfam | MGYG000002104_1 | MGYG000002104_1_123 | 133010 | 134425 | + | Mur_ligase_C | Mur_ligase_M |
| TC | MGYG000002104_1 | MGYG000002104_1_124 | 134429 | 136111 | + | 2.A.103.1.3 |
| NULL(UNKNOWN) | MGYG000002104_1 | MGYG000002104_1_125 | 137479 | 138501 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002104_1 | MGYG000002104_1_126 | 138538 | 139647 | + | GT28 |
Gene ID: MGYG000002104_1_122
Type: TC
Location: 131883 - 132911 (+)
Type: TC
Location: 131883 - 132911 (+)
Gene ID: MGYG000002104_1_123
Type: pfam
Location: 133010 - 134425 (+)
Type: pfam
Location: 133010 - 134425 (+)
Gene ID: MGYG000002104_1_124
Type: TC
Location: 134429 - 136111 (+)
Type: TC
Location: 134429 - 136111 (+)
Gene ID: MGYG000002104_1_125
Type:
Location: 137479 - 138501 (+)
Type:
Location: 137479 - 138501 (+)
Gene ID: MGYG000002104_1_126
Type: CAZyme
Location: 138538 - 139647 (+)
Type: CAZyme
Location: 138538 - 139647 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.