Cluster: MGYG000002104_CGC16
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 6
- Substrate: alpha-glucan
- Genome ID: MGYG000002104
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002104_18 | MGYG000002104_18_10 | 10720 | 12906 | + | CBM48 | GH13_9 |
| CAZyme | MGYG000002104_18 | MGYG000002104_18_11 | 13023 | 15467 | + | GT35 |
| pfam | MGYG000002104_18 | MGYG000002104_18_12 | 15532 | 16680 | + | NTP_transferase | Hexapep_GlmU |
| pfam | MGYG000002104_18 | MGYG000002104_18_13 | 16683 | 17777 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | MGYG000002104_18 | MGYG000002104_18_14 | 17802 | 19301 | + | GT5 |
| CAZyme | MGYG000002104_18 | MGYG000002104_18_15 | 19306 | 22575 | + | GH13_39 | GH77 |
| pfam | MGYG000002104_18 | MGYG000002104_18_16 | 22857 | 24038 | + | SPOR | Zn_Ribbon_1 |
| TF | MGYG000002104_18 | MGYG000002104_18_17 | 24169 | 25179 | + | LacI |
| CAZyme | MGYG000002104_18 | MGYG000002104_18_18 | 25581 | 26963 | + | GH32 |
| TC | MGYG000002104_18 | MGYG000002104_18_19 | 27039 | 28490 | + | 4.A.1.2.9 |
| CAZyme | MGYG000002104_18 | MGYG000002104_18_20 | 28595 | 30046 | + | GH32 |
Gene ID: MGYG000002104_18_10
Type: CAZyme
Location: 10720 - 12906 (+)
Type: CAZyme
Location: 10720 - 12906 (+)
Gene ID: MGYG000002104_18_11
Type: CAZyme
Location: 13023 - 15467 (+)
Type: CAZyme
Location: 13023 - 15467 (+)
Gene ID: MGYG000002104_18_12
Type: pfam
Location: 15532 - 16680 (+)
Type: pfam
Location: 15532 - 16680 (+)
Gene ID: MGYG000002104_18_13
Type: pfam
Location: 16683 - 17777 (+)
Type: pfam
Location: 16683 - 17777 (+)
Gene ID: MGYG000002104_18_14
Type: CAZyme
Location: 17802 - 19301 (+)
Type: CAZyme
Location: 17802 - 19301 (+)
Gene ID: MGYG000002104_18_15
Type: CAZyme
Location: 19306 - 22575 (+)
Type: CAZyme
Location: 19306 - 22575 (+)
Gene ID: MGYG000002104_18_16
Type: pfam
Location: 22857 - 24038 (+)
Type: pfam
Location: 22857 - 24038 (+)
Gene ID: MGYG000002104_18_17
Type: TF
Location: 24169 - 25179 (+)
Type: TF
Location: 24169 - 25179 (+)
Gene ID: MGYG000002104_18_18
Type: CAZyme
Location: 25581 - 26963 (+)
Type: CAZyme
Location: 25581 - 26963 (+)
Gene ID: MGYG000002104_18_19
Type: TC
Location: 27039 - 28490 (+)
Type: TC
Location: 27039 - 28490 (+)
Gene ID: MGYG000002104_18_20
Type: CAZyme
Location: 28595 - 30046 (+)
Type: CAZyme
Location: 28595 - 30046 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002104_18_14 | vegetarian > vegan | 1.05230 | 0.00863 |
| MGYG000002104_18_18 | vegan > omnivore | 1.03866 | 0.03181 |