Cluster: MGYG000002104_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002104
- CGC Family ID: CGCFAM_00391
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002104_1 | MGYG000002104_1_5 | 3109 | 4881 | + | GH3 |
| TF | MGYG000002104_1 | MGYG000002104_1_6 | 4932 | 5465 | + | MarR |
| NULL(UNKNOWN) | MGYG000002104_1 | MGYG000002104_1_7 | 5708 | 6733 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002104_1 | MGYG000002104_1_8 | 6739 | 8256 | + | GH3 |
| NULL(UNKNOWN) | MGYG000002104_1 | MGYG000002104_1_9 | 8258 | 8704 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002104_1 | MGYG000002104_1_10 | 8814 | 10130 | + | 2.A.2.3.5 |
Gene ID: MGYG000002104_1_5
Type: CAZyme
Location: 3109 - 4881 (+)
Type: CAZyme
Location: 3109 - 4881 (+)
Gene ID: MGYG000002104_1_6
Type: TF
Location: 4932 - 5465 (+)
Type: TF
Location: 4932 - 5465 (+)
Gene ID: MGYG000002104_1_7
Type:
Location: 5708 - 6733 (+)
Type:
Location: 5708 - 6733 (+)
Gene ID: MGYG000002104_1_8
Type: CAZyme
Location: 6739 - 8256 (+)
Type: CAZyme
Location: 6739 - 8256 (+)
Gene ID: MGYG000002104_1_9
Type:
Location: 8258 - 8704 (+)
Type:
Location: 8258 - 8704 (+)
Gene ID: MGYG000002104_1_10
Type: TC
Location: 8814 - 10130 (+)
Type: TC
Location: 8814 - 10130 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.