Cluster: MGYG000002100_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002100
- CGC Family ID: CGCFAM_00019
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002100_2 | MGYG000002100_2_8 | 9941 | 11323 | - | GH4 |
| TC | MGYG000002100_2 | MGYG000002100_2_9 | 11327 | 12943 | - | 4.A.1.1.3 |
| pfam | MGYG000002100_2 | MGYG000002100_2_10 | 13043 | 13909 | - | PRD | PRD | CAT_RBD |
| TC | MGYG000002100_2 | MGYG000002100_2_11 | 13916 | 14428 | - | 4.A.1.1.1 |
| STP | MGYG000002100_2 | MGYG000002100_2_12 | 14772 | 15533 | - | Fer4 | Fer4 |
| TC | MGYG000002100_2 | MGYG000002100_2_13 | 16190 | 18439 | - | 1.I.1.1.3 |
Gene ID: MGYG000002100_2_8
Type: CAZyme
Location: 9941 - 11323 (-)
Type: CAZyme
Location: 9941 - 11323 (-)
Gene ID: MGYG000002100_2_9
Type: TC
Location: 11327 - 12943 (-)
Type: TC
Location: 11327 - 12943 (-)
Gene ID: MGYG000002100_2_10
Type: pfam
Location: 13043 - 13909 (-)
Type: pfam
Location: 13043 - 13909 (-)
Gene ID: MGYG000002100_2_11
Type: TC
Location: 13916 - 14428 (-)
Type: TC
Location: 13916 - 14428 (-)
Gene ID: MGYG000002100_2_12
Type: STP
Location: 14772 - 15533 (-)
Type: STP
Location: 14772 - 15533 (-)
Gene ID: MGYG000002100_2_13
Type: TC
Location: 16190 - 18439 (-)
Type: TC
Location: 16190 - 18439 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902475785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.