Cluster: MGYG000002083_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002083
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002083_11 | MGYG000002083_11_57 | 66202 | 69210 | + | GH2 |
| NULL(UNKNOWN) | MGYG000002083_11 | MGYG000002083_11_58 | 69214 | 69669 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002083_11 | MGYG000002083_11_59 | 69823 | 71286 | + | 2.A.3.7.4 |
| STP | MGYG000002083_11 | MGYG000002083_11_60 | 71708 | 71956 | + | PTS-HPr |
| STP | MGYG000002083_11 | MGYG000002083_11_61 | 72145 | 72387 | + | FeoA |
| TC | MGYG000002083_11 | MGYG000002083_11_62 | 72425 | 72646 | + | 9.A.8.1.6 |
| TC | MGYG000002083_11 | MGYG000002083_11_63 | 72770 | 75097 | + | 9.A.8.1.6 |
Gene ID: MGYG000002083_11_57
Type: CAZyme
Location: 66202 - 69210 (+)
Type: CAZyme
Location: 66202 - 69210 (+)
Gene ID: MGYG000002083_11_58
Type:
Location: 69214 - 69669 (+)
Type:
Location: 69214 - 69669 (+)
Gene ID: MGYG000002083_11_59
Type: TC
Location: 69823 - 71286 (+)
Type: TC
Location: 69823 - 71286 (+)
Gene ID: MGYG000002083_11_60
Type: STP
Location: 71708 - 71956 (+)
Type: STP
Location: 71708 - 71956 (+)
Gene ID: MGYG000002083_11_61
Type: STP
Location: 72145 - 72387 (+)
Type: STP
Location: 72145 - 72387 (+)
Gene ID: MGYG000002083_11_62
Type: TC
Location: 72425 - 72646 (+)
Type: TC
Location: 72425 - 72646 (+)
Gene ID: MGYG000002083_11_63
Type: TC
Location: 72770 - 75097 (+)
Type: TC
Location: 72770 - 75097 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902475525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.