Cluster: MGYG000002079_CGC2
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000002079
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002079_1 | MGYG000002079_1_81 | 87351 | 88292 | + | 2.A.115.1.2 |
| CAZyme | MGYG000002079_1 | MGYG000002079_1_82 | 88524 | 89663 | - | PL38 |
| TC | MGYG000002079_1 | MGYG000002079_1_83 | 89682 | 91889 | - | 3.A.16.1.2 |
| TC | MGYG000002079_1 | MGYG000002079_1_84 | 92145 | 95585 | + | 3.B.1.1.1 |
| pfam | MGYG000002079_1 | MGYG000002079_1_85 | 95717 | 96736 | + | Metallophos |
| NULL(UNKNOWN) | MGYG000002079_1 | MGYG000002079_1_86 | 96784 | 98550 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002079_1 | MGYG000002079_1_87 | 98616 | 100007 | - | 2.A.25.1.4 |
| STP | MGYG000002079_1 | MGYG000002079_1_88 | 100454 | 101653 | + | HhH-GPD |
| STP | MGYG000002079_1 | MGYG000002079_1_89 | 101907 | 102545 | + | Sigma70_r4_2 |
| TC | MGYG000002079_1 | MGYG000002079_1_90 | 102685 | 104025 | + | 2.A.23.3.3 |
| pfam | MGYG000002079_1 | MGYG000002079_1_91 | 104463 | 113357 | + | SLH | Collagen | YadA_anchor | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_stalk | YadA_stalk | YadA_stalk | YadA_stalk | YadA_stalk | YadA_stalk | YadA_stalk |
| pfam | MGYG000002079_1 | MGYG000002079_1_92 | 113485 | 113874 | - | GtrA_DPMS_TM |
| TC | MGYG000002079_1 | MGYG000002079_1_93 | 113884 | 115332 | - | 9.B.18.1.2 |
| CAZyme | MGYG000002079_1 | MGYG000002079_1_94 | 115345 | 116109 | - | GT2 |
| CAZyme | MGYG000002079_1 | MGYG000002079_1_95 | 116128 | 117075 | - | GT8 |
Gene ID: MGYG000002079_1_81
Type: TC
Location: 87351 - 88292 (+)
Type: TC
Location: 87351 - 88292 (+)
Gene ID: MGYG000002079_1_82
Type: CAZyme
Location: 88524 - 89663 (-)
Type: CAZyme
Location: 88524 - 89663 (-)
Gene ID: MGYG000002079_1_83
Type: TC
Location: 89682 - 91889 (-)
Type: TC
Location: 89682 - 91889 (-)
Gene ID: MGYG000002079_1_84
Type: TC
Location: 92145 - 95585 (+)
Type: TC
Location: 92145 - 95585 (+)
Gene ID: MGYG000002079_1_85
Type: pfam
Location: 95717 - 96736 (+)
Type: pfam
Location: 95717 - 96736 (+)
Gene ID: MGYG000002079_1_86
Type:
Location: 96784 - 98550 (+)
Type:
Location: 96784 - 98550 (+)
Gene ID: MGYG000002079_1_87
Type: TC
Location: 98616 - 100007 (-)
Type: TC
Location: 98616 - 100007 (-)
Gene ID: MGYG000002079_1_88
Type: STP
Location: 100454 - 101653 (+)
Type: STP
Location: 100454 - 101653 (+)
Gene ID: MGYG000002079_1_89
Type: STP
Location: 101907 - 102545 (+)
Type: STP
Location: 101907 - 102545 (+)
Gene ID: MGYG000002079_1_90
Type: TC
Location: 102685 - 104025 (+)
Type: TC
Location: 102685 - 104025 (+)
Gene ID: MGYG000002079_1_91
Type: pfam
Location: 104463 - 113357 (+)
Type: pfam
Location: 104463 - 113357 (+)
Gene ID: MGYG000002079_1_92
Type: pfam
Location: 113485 - 113874 (-)
Type: pfam
Location: 113485 - 113874 (-)
Gene ID: MGYG000002079_1_93
Type: TC
Location: 113884 - 115332 (-)
Type: TC
Location: 113884 - 115332 (-)
Gene ID: MGYG000002079_1_94
Type: CAZyme
Location: 115345 - 116109 (-)
Type: CAZyme
Location: 115345 - 116109 (-)
Gene ID: MGYG000002079_1_95
Type: CAZyme
Location: 116128 - 117075 (-)
Type: CAZyme
Location: 116128 - 117075 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Succiniclasticum
Species
Succiniclasticum sp900315805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.