Cluster: MGYG000002078_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002078
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002078_19 | MGYG000002078_19_3 | 1328 | 3655 | - | 9.A.8.1.6 |
| TC | MGYG000002078_19 | MGYG000002078_19_4 | 3779 | 4000 | - | 9.A.8.1.6 |
| STP | MGYG000002078_19 | MGYG000002078_19_5 | 4040 | 4282 | - | FeoA |
| STP | MGYG000002078_19 | MGYG000002078_19_6 | 4471 | 4719 | - | PTS-HPr |
| TC | MGYG000002078_19 | MGYG000002078_19_7 | 5141 | 6604 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | MGYG000002078_19 | MGYG000002078_19_8 | 6758 | 7213 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002078_19 | MGYG000002078_19_9 | 7217 | 10225 | - | GH2 |
Gene ID: MGYG000002078_19_3
Type: TC
Location: 1328 - 3655 (-)
Type: TC
Location: 1328 - 3655 (-)
Gene ID: MGYG000002078_19_4
Type: TC
Location: 3779 - 4000 (-)
Type: TC
Location: 3779 - 4000 (-)
Gene ID: MGYG000002078_19_5
Type: STP
Location: 4040 - 4282 (-)
Type: STP
Location: 4040 - 4282 (-)
Gene ID: MGYG000002078_19_6
Type: STP
Location: 4471 - 4719 (-)
Type: STP
Location: 4471 - 4719 (-)
Gene ID: MGYG000002078_19_7
Type: TC
Location: 5141 - 6604 (-)
Type: TC
Location: 5141 - 6604 (-)
Gene ID: MGYG000002078_19_8
Type:
Location: 6758 - 7213 (-)
Type:
Location: 6758 - 7213 (-)
Gene ID: MGYG000002078_19_9
Type: CAZyme
Location: 7217 - 10225 (-)
Type: CAZyme
Location: 7217 - 10225 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902475475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.