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Cluster: MGYG000002078_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002078_10 MGYG000002078_10_2 414 2192 - 4.A.3.1.1
TF MGYG000002078_10 MGYG000002078_10_3 2468 3478 + LacI
TC MGYG000002078_10 MGYG000002078_10_4 3731 5491 - 4.A.3.1.1
CAZyme MGYG000002078_10 MGYG000002078_10_5 5668 7110 - GH1
TF MGYG000002078_10 MGYG000002078_10_6 7452 8489 + LacI
CAZyme MGYG000002078_10 MGYG000002078_10_7 8757 10196 - GH1
TC MGYG000002078_10 MGYG000002078_10_8 10263 12038 - 4.A.3.1.1
TF MGYG000002078_10 MGYG000002078_10_9 12396 13400 + LacI
TC MGYG000002078_10 MGYG000002078_10_10 13615 13953 + 4.A.3.1.2
Gene ID: MGYG000002078_10_2
Type: TC
Location: 414 - 2192 (-)
Gene ID: MGYG000002078_10_3
Type: TF
Location: 2468 - 3478 (+)
Gene ID: MGYG000002078_10_4
Type: TC
Location: 3731 - 5491 (-)
Gene ID: MGYG000002078_10_5
Type: CAZyme
Location: 5668 - 7110 (-)
Gene ID: MGYG000002078_10_6
Type: TF
Location: 7452 - 8489 (+)
Gene ID: MGYG000002078_10_7
Type: CAZyme
Location: 8757 - 10196 (-)
Gene ID: MGYG000002078_10_8
Type: TC
Location: 10263 - 12038 (-)
Gene ID: MGYG000002078_10_9
Type: TF
Location: 12396 - 13400 (+)
Gene ID: MGYG000002078_10_10
Type: TC
Location: 13615 - 13953 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002078_10_6 vegetarian > omnivore 1.07522 0.02677

🧭 Explore Read Mapping of CGC

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