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Cluster: MGYG000002055_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002055_12 MGYG000002055_12_7 5406 6782 - GH13_20
TC MGYG000002055_12 MGYG000002055_12_8 6936 8132 - 2.A.1.2.18
TC MGYG000002055_12 MGYG000002055_12_9 8253 10613 - 9.A.8.1.6
pfam MGYG000002055_12 MGYG000002055_12_10 11076 12257 + Zn_Ribbon_1
peptidase MGYG000002055_12 MGYG000002055_12_11 12681 13580 - S09.UPW
TC MGYG000002055_12 MGYG000002055_12_12 13828 14391 + 4.A.1.2.6
TC MGYG000002055_12 MGYG000002055_12_13 14626 16560 + 9.B.97.5.1
pfam MGYG000002055_12 MGYG000002055_12_14 16696 18099 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) MGYG000002055_12 MGYG000002055_12_15 18358 19143 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000002055_12 MGYG000002055_12_16 19304 20284 + 3.A.1.34.1
TC MGYG000002055_12 MGYG000002055_12_17 20489 21412 + 3.A.1.34.1
TC MGYG000002055_12 MGYG000002055_12_18 21405 22199 + 3.A.1.34.1
TC MGYG000002055_12 MGYG000002055_12_19 22393 23160 + 1.A.23.4.2
pfam MGYG000002055_12 MGYG000002055_12_20 23255 25171 + Bmp
pfam MGYG000002055_12 MGYG000002055_12_21 25168 25878 + Metallophos | Metallophos_2
TC MGYG000002055_12 MGYG000002055_12_22 26004 26711 - 1.C.82.1.1
Gene ID: MGYG000002055_12_7
Type: CAZyme
Location: 5406 - 6782 (-)
Gene ID: MGYG000002055_12_8
Type: TC
Location: 6936 - 8132 (-)
Gene ID: MGYG000002055_12_9
Type: TC
Location: 8253 - 10613 (-)
Gene ID: MGYG000002055_12_10
Type: pfam
Location: 11076 - 12257 (+)
Gene ID: MGYG000002055_12_11
Type: peptidase
Location: 12681 - 13580 (-)
Gene ID: MGYG000002055_12_12
Type: TC
Location: 13828 - 14391 (+)
Gene ID: MGYG000002055_12_13
Type: TC
Location: 14626 - 16560 (+)
Gene ID: MGYG000002055_12_14
Type: pfam
Location: 16696 - 18099 (+)
Gene ID: MGYG000002055_12_15
Type:
Location: 18358 - 19143 (+)
Gene ID: MGYG000002055_12_16
Type: TC
Location: 19304 - 20284 (+)
Gene ID: MGYG000002055_12_17
Type: TC
Location: 20489 - 21412 (+)
Gene ID: MGYG000002055_12_18
Type: TC
Location: 21405 - 22199 (+)
Gene ID: MGYG000002055_12_19
Type: TC
Location: 22393 - 23160 (+)
Gene ID: MGYG000002055_12_20
Type: pfam
Location: 23255 - 25171 (+)
Gene ID: MGYG000002055_12_21
Type: pfam
Location: 25168 - 25878 (+)
Gene ID: MGYG000002055_12_22
Type: TC
Location: 26004 - 26711 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002055_12_10 vegetarian > vegan 16.38748 0.01332
MGYG000002055_12_13 vegan > omnivore 1.37110 0.00455
MGYG000002055_12_13 vegetarian > omnivore 1.41036 0.02534

🧭 Explore Read Mapping of CGC

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