Cluster: MGYG000002054_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002054
- CGC Family ID: CGCFAM_00428
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002054_3 | MGYG000002054_3_44 | 55280 | 56707 | + | 4.A.1.2.11 |
| CAZyme | MGYG000002054_3 | MGYG000002054_3_45 | 56917 | 58230 | + | GH140 |
| sulfatase | MGYG000002054_3 | MGYG000002054_3_46 | 58638 | 59549 | + | S1_7 |
| TF | MGYG000002054_3 | MGYG000002054_3_47 | 59939 | 61471 | + | GerE |
| TC | MGYG000002054_3 | MGYG000002054_3_48 | 61582 | 64350 | - | 3.A.3.4.1 |
Gene ID: MGYG000002054_3_44
Type: TC
Location: 55280 - 56707 (+)
Type: TC
Location: 55280 - 56707 (+)
Gene ID: MGYG000002054_3_45
Type: CAZyme
Location: 56917 - 58230 (+)
Type: CAZyme
Location: 56917 - 58230 (+)
Gene ID: MGYG000002054_3_46
Type: sulfatase
Location: 58638 - 59549 (+)
Type: sulfatase
Location: 58638 - 59549 (+)
Gene ID: MGYG000002054_3_47
Type: TF
Location: 59939 - 61471 (+)
Type: TF
Location: 59939 - 61471 (+)
Gene ID: MGYG000002054_3_48
Type: TC
Location: 61582 - 64350 (-)
Type: TC
Location: 61582 - 64350 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp027671585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.