Cluster: MGYG000002054_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002054
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002054_1 | MGYG000002054_1_76 | 92240 | 95248 | + | GH2 |
| NULL(UNKNOWN) | MGYG000002054_1 | MGYG000002054_1_77 | 95252 | 95707 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002054_1 | MGYG000002054_1_78 | 95861 | 97324 | + | 2.A.3.7.4 |
| STP | MGYG000002054_1 | MGYG000002054_1_79 | 97746 | 97994 | + | PTS-HPr |
| STP | MGYG000002054_1 | MGYG000002054_1_80 | 98231 | 98473 | + | FeoA |
| TC | MGYG000002054_1 | MGYG000002054_1_81 | 98511 | 98732 | + | 9.A.8.1.6 |
| TC | MGYG000002054_1 | MGYG000002054_1_82 | 98856 | 101183 | + | 9.A.8.1.6 |
Gene ID: MGYG000002054_1_76
Type: CAZyme
Location: 92240 - 95248 (+)
Type: CAZyme
Location: 92240 - 95248 (+)
Gene ID: MGYG000002054_1_77
Type:
Location: 95252 - 95707 (+)
Type:
Location: 95252 - 95707 (+)
Gene ID: MGYG000002054_1_78
Type: TC
Location: 95861 - 97324 (+)
Type: TC
Location: 95861 - 97324 (+)
Gene ID: MGYG000002054_1_79
Type: STP
Location: 97746 - 97994 (+)
Type: STP
Location: 97746 - 97994 (+)
Gene ID: MGYG000002054_1_80
Type: STP
Location: 98231 - 98473 (+)
Type: STP
Location: 98231 - 98473 (+)
Gene ID: MGYG000002054_1_81
Type: TC
Location: 98511 - 98732 (+)
Type: TC
Location: 98511 - 98732 (+)
Gene ID: MGYG000002054_1_82
Type: TC
Location: 98856 - 101183 (+)
Type: TC
Location: 98856 - 101183 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp027671585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.