Cluster: MGYG000002050_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002050
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002050_30 | MGYG000002050_30_17 | 17738 | 18076 | - | 4.A.3.1.2 |
| TF | MGYG000002050_30 | MGYG000002050_30_18 | 18291 | 19295 | - | LacI |
| TC | MGYG000002050_30 | MGYG000002050_30_19 | 19653 | 21419 | + | 4.A.3.1.1 |
| CAZyme | MGYG000002050_30 | MGYG000002050_30_20 | 21486 | 22925 | + | GH1 |
| TF | MGYG000002050_30 | MGYG000002050_30_21 | 23193 | 24230 | - | LacI |
| CAZyme | MGYG000002050_30 | MGYG000002050_30_22 | 24572 | 26014 | + | GH1 |
| TC | MGYG000002050_30 | MGYG000002050_30_23 | 26191 | 27951 | + | 4.A.3.1.1 |
Gene ID: MGYG000002050_30_17
Type: TC
Location: 17738 - 18076 (-)
Type: TC
Location: 17738 - 18076 (-)
Gene ID: MGYG000002050_30_18
Type: TF
Location: 18291 - 19295 (-)
Type: TF
Location: 18291 - 19295 (-)
Gene ID: MGYG000002050_30_19
Type: TC
Location: 19653 - 21419 (+)
Type: TC
Location: 19653 - 21419 (+)
Gene ID: MGYG000002050_30_20
Type: CAZyme
Location: 21486 - 22925 (+)
Type: CAZyme
Location: 21486 - 22925 (+)
Gene ID: MGYG000002050_30_21
Type: TF
Location: 23193 - 24230 (-)
Type: TF
Location: 23193 - 24230 (-)
Gene ID: MGYG000002050_30_22
Type: CAZyme
Location: 24572 - 26014 (+)
Type: CAZyme
Location: 24572 - 26014 (+)
Gene ID: MGYG000002050_30_23
Type: TC
Location: 26191 - 27951 (+)
Type: TC
Location: 26191 - 27951 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902475245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.