Cluster: MGYG000002050_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002050
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002050_1 | MGYG000002050_1_129 | 158829 | 161837 | + | GH2 |
| NULL(UNKNOWN) | MGYG000002050_1 | MGYG000002050_1_130 | 161841 | 162296 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002050_1 | MGYG000002050_1_131 | 162450 | 163913 | + | 2.A.3.7.4 |
| STP | MGYG000002050_1 | MGYG000002050_1_132 | 164334 | 164582 | + | PTS-HPr |
| STP | MGYG000002050_1 | MGYG000002050_1_133 | 164768 | 165010 | + | FeoA |
| TC | MGYG000002050_1 | MGYG000002050_1_134 | 165050 | 165271 | + | 9.A.8.1.6 |
| TC | MGYG000002050_1 | MGYG000002050_1_135 | 165395 | 167722 | + | 9.A.8.1.6 |
Gene ID: MGYG000002050_1_129
Type: CAZyme
Location: 158829 - 161837 (+)
Type: CAZyme
Location: 158829 - 161837 (+)
Gene ID: MGYG000002050_1_130
Type:
Location: 161841 - 162296 (+)
Type:
Location: 161841 - 162296 (+)
Gene ID: MGYG000002050_1_131
Type: TC
Location: 162450 - 163913 (+)
Type: TC
Location: 162450 - 163913 (+)
Gene ID: MGYG000002050_1_132
Type: STP
Location: 164334 - 164582 (+)
Type: STP
Location: 164334 - 164582 (+)
Gene ID: MGYG000002050_1_133
Type: STP
Location: 164768 - 165010 (+)
Type: STP
Location: 164768 - 165010 (+)
Gene ID: MGYG000002050_1_134
Type: TC
Location: 165050 - 165271 (+)
Type: TC
Location: 165050 - 165271 (+)
Gene ID: MGYG000002050_1_135
Type: TC
Location: 165395 - 167722 (+)
Type: TC
Location: 165395 - 167722 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902475245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.