Cluster: MGYG000002041_CGC11
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002041
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002041_51 | MGYG000002041_51_5 | 4646 | 6022 | - | 3.A.1.17.10 |
| NULL(UNKNOWN) | MGYG000002041_51 | MGYG000002041_51_6 | 6026 | 7081 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002041_51 | MGYG000002041_51_7 | 7084 | 8895 | - | 3.D.1.5.1 |
| STP | MGYG000002041_51 | MGYG000002041_51_8 | 8889 | 10721 | - | Pyr_redox_2 |
| CAZyme | MGYG000002041_51 | MGYG000002041_51_9 | 10978 | 12360 | - | GH4 |
| TC | MGYG000002041_51 | MGYG000002041_51_10 | 12364 | 13980 | - | 4.A.1.1.3 |
| pfam | MGYG000002041_51 | MGYG000002041_51_11 | 14080 | 14946 | - | PRD | PRD | CAT_RBD |
| TC | MGYG000002041_51 | MGYG000002041_51_12 | 14953 | 15465 | - | 4.A.1.2.5 |
Gene ID: MGYG000002041_51_5
Type: TC
Location: 4646 - 6022 (-)
Type: TC
Location: 4646 - 6022 (-)
Gene ID: MGYG000002041_51_6
Type:
Location: 6026 - 7081 (-)
Type:
Location: 6026 - 7081 (-)
Gene ID: MGYG000002041_51_7
Type: TC
Location: 7084 - 8895 (-)
Type: TC
Location: 7084 - 8895 (-)
Gene ID: MGYG000002041_51_8
Type: STP
Location: 8889 - 10721 (-)
Type: STP
Location: 8889 - 10721 (-)
Gene ID: MGYG000002041_51_9
Type: CAZyme
Location: 10978 - 12360 (-)
Type: CAZyme
Location: 10978 - 12360 (-)
Gene ID: MGYG000002041_51_10
Type: TC
Location: 12364 - 13980 (-)
Type: TC
Location: 12364 - 13980 (-)
Gene ID: MGYG000002041_51_11
Type: pfam
Location: 14080 - 14946 (-)
Type: pfam
Location: 14080 - 14946 (-)
Gene ID: MGYG000002041_51_12
Type: TC
Location: 14953 - 15465 (-)
Type: TC
Location: 14953 - 15465 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900540835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.