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Cluster: MGYG000002040_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002040_4 MGYG000002040_4_57 63799 65154 - 3.A.5.2.2
STP MGYG000002040_4 MGYG000002040_4_58 65182 65565 - Sigma70_r4
STP MGYG000002040_4 MGYG000002040_4_59 65791 66699 + PALP
TC MGYG000002040_4 MGYG000002040_4_60 66732 68060 + 2.A.66.1.33
TC MGYG000002040_4 MGYG000002040_4_61 68112 68936 - 3.A.1.34.1
TC MGYG000002040_4 MGYG000002040_4_62 68938 69867 - 3.A.1.34.1
pfam MGYG000002040_4 MGYG000002040_4_63 69898 70995 - ABC_sub_bind
NULL(UNKNOWN) MGYG000002040_4 MGYG000002040_4_64 71445 72278 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000002040_4 MGYG000002040_4_65 72272 72973 - 3.A.1.132.6
TF MGYG000002040_4 MGYG000002040_4_66 72966 73346 - GntR
CAZyme MGYG000002040_4 MGYG000002040_4_67 73497 74495 + GT2
Gene ID: MGYG000002040_4_57
Type: TC
Location: 63799 - 65154 (-)
Gene ID: MGYG000002040_4_58
Type: STP
Location: 65182 - 65565 (-)
Gene ID: MGYG000002040_4_59
Type: STP
Location: 65791 - 66699 (+)
Gene ID: MGYG000002040_4_60
Type: TC
Location: 66732 - 68060 (+)
Gene ID: MGYG000002040_4_61
Type: TC
Location: 68112 - 68936 (-)
Gene ID: MGYG000002040_4_62
Type: TC
Location: 68938 - 69867 (-)
Gene ID: MGYG000002040_4_63
Type: pfam
Location: 69898 - 70995 (-)
Gene ID: MGYG000002040_4_64
Type:
Location: 71445 - 72278 (-)
Gene ID: MGYG000002040_4_65
Type: TC
Location: 72272 - 72973 (-)
Gene ID: MGYG000002040_4_66
Type: TF
Location: 72966 - 73346 (-)
Gene ID: MGYG000002040_4_67
Type: CAZyme
Location: 73497 - 74495 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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