Cluster: MGYG000002032_CGC6
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002032
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002032_7 | MGYG000002032_7_27 | 30913 | 32289 | - | GH13_20 |
| TC | MGYG000002032_7 | MGYG000002032_7_28 | 32443 | 33639 | - | 2.A.1.2.18 |
| TC | MGYG000002032_7 | MGYG000002032_7_29 | 33760 | 36120 | - | 9.A.8.1.6 |
| peptidase | MGYG000002032_7 | MGYG000002032_7_30 | 36594 | 37493 | - | S09.UPW |
| TC | MGYG000002032_7 | MGYG000002032_7_31 | 37737 | 38300 | + | 4.A.1.2.6 |
| pfam | MGYG000002032_7 | MGYG000002032_7_32 | 38482 | 39885 | + | tRNA-synt_2 | tRNA_anti-codon |
| NULL(UNKNOWN) | MGYG000002032_7 | MGYG000002032_7_33 | 40144 | 40929 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002032_7 | MGYG000002032_7_34 | 41091 | 42071 | + | 3.A.1.34.1 |
| TC | MGYG000002032_7 | MGYG000002032_7_35 | 42276 | 43199 | + | 3.A.1.34.1 |
| TC | MGYG000002032_7 | MGYG000002032_7_36 | 43192 | 43986 | + | 3.A.1.34.1 |
Gene ID: MGYG000002032_7_27
Type: CAZyme
Location: 30913 - 32289 (-)
Type: CAZyme
Location: 30913 - 32289 (-)
Gene ID: MGYG000002032_7_28
Type: TC
Location: 32443 - 33639 (-)
Type: TC
Location: 32443 - 33639 (-)
Gene ID: MGYG000002032_7_29
Type: TC
Location: 33760 - 36120 (-)
Type: TC
Location: 33760 - 36120 (-)
Gene ID: MGYG000002032_7_30
Type: peptidase
Location: 36594 - 37493 (-)
Type: peptidase
Location: 36594 - 37493 (-)
Gene ID: MGYG000002032_7_31
Type: TC
Location: 37737 - 38300 (+)
Type: TC
Location: 37737 - 38300 (+)
Gene ID: MGYG000002032_7_32
Type: pfam
Location: 38482 - 39885 (+)
Type: pfam
Location: 38482 - 39885 (+)
Gene ID: MGYG000002032_7_33
Type:
Location: 40144 - 40929 (+)
Type:
Location: 40144 - 40929 (+)
Gene ID: MGYG000002032_7_34
Type: TC
Location: 41091 - 42071 (+)
Type: TC
Location: 41091 - 42071 (+)
Gene ID: MGYG000002032_7_35
Type: TC
Location: 42276 - 43199 (+)
Type: TC
Location: 42276 - 43199 (+)
Gene ID: MGYG000002032_7_36
Type: TC
Location: 43192 - 43986 (+)
Type: TC
Location: 43192 - 43986 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp905213265
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.