Cluster: MGYG000002032_CGC4
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002032
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002032_5 | MGYG000002032_5_44 | 45043 | 46485 | + | 3.A.1.8.1 |
| TC | MGYG000002032_5 | MGYG000002032_5_45 | 46489 | 47559 | + | 3.A.1.1.3 |
| pfam | MGYG000002032_5 | MGYG000002032_5_46 | 47989 | 49272 | + | HGD-D |
| TC | MGYG000002032_5 | MGYG000002032_5_47 | 49456 | 51066 | + | 3.A.1.5.11 |
| TC | MGYG000002032_5 | MGYG000002032_5_48 | 51155 | 52108 | + | 3.A.1.5.11 |
| TC | MGYG000002032_5 | MGYG000002032_5_49 | 52105 | 52935 | + | 3.A.1.5.39 |
| TC | MGYG000002032_5 | MGYG000002032_5_50 | 52939 | 53934 | + | 3.A.1.5.37 |
| TC | MGYG000002032_5 | MGYG000002032_5_51 | 53924 | 54709 | + | 3.A.1.5.36 |
| pfam | MGYG000002032_5 | MGYG000002032_5_52 | 54786 | 55949 | + | HGD-D |
| pfam | MGYG000002032_5 | MGYG000002032_5_53 | 56104 | 56868 | + | BcrAD_BadFG |
| CAZyme | MGYG000002032_5 | MGYG000002032_5_54 | 56883 | 58100 | + | GT4 |
Gene ID: MGYG000002032_5_44
Type: TC
Location: 45043 - 46485 (+)
Type: TC
Location: 45043 - 46485 (+)
Gene ID: MGYG000002032_5_45
Type: TC
Location: 46489 - 47559 (+)
Type: TC
Location: 46489 - 47559 (+)
Gene ID: MGYG000002032_5_46
Type: pfam
Location: 47989 - 49272 (+)
Type: pfam
Location: 47989 - 49272 (+)
Gene ID: MGYG000002032_5_47
Type: TC
Location: 49456 - 51066 (+)
Type: TC
Location: 49456 - 51066 (+)
Gene ID: MGYG000002032_5_48
Type: TC
Location: 51155 - 52108 (+)
Type: TC
Location: 51155 - 52108 (+)
Gene ID: MGYG000002032_5_49
Type: TC
Location: 52105 - 52935 (+)
Type: TC
Location: 52105 - 52935 (+)
Gene ID: MGYG000002032_5_50
Type: TC
Location: 52939 - 53934 (+)
Type: TC
Location: 52939 - 53934 (+)
Gene ID: MGYG000002032_5_51
Type: TC
Location: 53924 - 54709 (+)
Type: TC
Location: 53924 - 54709 (+)
Gene ID: MGYG000002032_5_52
Type: pfam
Location: 54786 - 55949 (+)
Type: pfam
Location: 54786 - 55949 (+)
Gene ID: MGYG000002032_5_53
Type: pfam
Location: 56104 - 56868 (+)
Type: pfam
Location: 56104 - 56868 (+)
Gene ID: MGYG000002032_5_54
Type: CAZyme
Location: 56883 - 58100 (+)
Type: CAZyme
Location: 56883 - 58100 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp905213265
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002032_5_47 | vegan > omnivore | 3.32325 | 0.00863 |
| MGYG000002032_5_47 | vegetarian > omnivore | 1.05235 | 0.03201 |
| MGYG000002032_5_48 | vegan > omnivore | 2.82651 | 0.00863 |
| MGYG000002032_5_48 | vegetarian > omnivore | 1.22348 | 0.03201 |
| MGYG000002032_5_49 | vegan > omnivore | 3.00209 | 0.00863 |
| MGYG000002032_5_49 | vegetarian > omnivore | 1.23657 | 0.03201 |
| MGYG000002032_5_50 | vegan > omnivore | 1.00134 | 0.00863 |
| MGYG000002032_5_51 | vegan > omnivore | 2.84134 | 0.00863 |
| MGYG000002032_5_54 | vegan > omnivore | 1.67329 | 0.00863 |