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Cluster: MGYG000002028_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002028_18 MGYG000002028_18_24 27856 29025 - CE9
STP MGYG000002028_18 MGYG000002028_18_25 29145 30311 - SIS | SIS
TF MGYG000002028_18 MGYG000002028_18_26 30426 31157 - GntR
TC MGYG000002028_18 MGYG000002028_18_27 31343 32425 - 4.A.6.1.4
TC MGYG000002028_18 MGYG000002028_18_28 32415 33215 - 4.A.6.1.4
TC MGYG000002028_18 MGYG000002028_18_29 33303 33785 - 4.A.6.1.4
pfam MGYG000002028_18 MGYG000002028_18_30 33822 34103 - YajC
TC MGYG000002028_18 MGYG000002028_18_31 34103 34546 - 4.A.6.1.16
Gene ID: MGYG000002028_18_24
Type: CAZyme
Location: 27856 - 29025 (-)
Gene ID: MGYG000002028_18_25
Type: STP
Location: 29145 - 30311 (-)
Gene ID: MGYG000002028_18_26
Type: TF
Location: 30426 - 31157 (-)
Gene ID: MGYG000002028_18_27
Type: TC
Location: 31343 - 32425 (-)
Gene ID: MGYG000002028_18_28
Type: TC
Location: 32415 - 33215 (-)
Gene ID: MGYG000002028_18_29
Type: TC
Location: 33303 - 33785 (-)
Gene ID: MGYG000002028_18_30
Type: pfam
Location: 33822 - 34103 (-)
Gene ID: MGYG000002028_18_31
Type: TC
Location: 34103 - 34546 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002028_18_30 vegan > omnivore 1.02170 0.00863

🧭 Explore Read Mapping of CGC

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