Cluster: MGYG000002025_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000002025
- CGC Family ID: CGCFAM_00233
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002025_4 | MGYG000002025_4_75 | 58483 | 61539 | + | GH3 |
| CAZyme | MGYG000002025_4 | MGYG000002025_4_76 | 61552 | 63480 | + | GH2 |
| TC | MGYG000002025_4 | MGYG000002025_4_77 | 63526 | 65088 | + | 2.A.2.3.5 |
| TF | MGYG000002025_4 | MGYG000002025_4_78 | 65295 | 66074 | + | LytTR |
| pfam | MGYG000002025_4 | MGYG000002025_4_79 | 66071 | 67411 | + | HATPase_c_5 |
| CAZyme | MGYG000002025_4 | MGYG000002025_4_80 | 67655 | 70009 | + | GH3 |
Gene ID: MGYG000002025_4_75
Type: CAZyme
Location: 58483 - 61539 (+)
Type: CAZyme
Location: 58483 - 61539 (+)
Gene ID: MGYG000002025_4_76
Type: CAZyme
Location: 61552 - 63480 (+)
Type: CAZyme
Location: 61552 - 63480 (+)
Gene ID: MGYG000002025_4_77
Type: TC
Location: 63526 - 65088 (+)
Type: TC
Location: 63526 - 65088 (+)
Gene ID: MGYG000002025_4_78
Type: TF
Location: 65295 - 66074 (+)
Type: TF
Location: 65295 - 66074 (+)
Gene ID: MGYG000002025_4_79
Type: pfam
Location: 66071 - 67411 (+)
Type: pfam
Location: 66071 - 67411 (+)
Gene ID: MGYG000002025_4_80
Type: CAZyme
Location: 67655 - 70009 (+)
Type: CAZyme
Location: 67655 - 70009 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Merdiplasma
Species
Merdiplasma sp905207905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.