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Cluster: MGYG000002025_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002025_3 MGYG000002025_3_46 50687 52084 + 9.B.18.1.3
CAZyme MGYG000002025_3 MGYG000002025_3_47 52024 52932 + GT2
TC MGYG000002025_3 MGYG000002025_3_48 53229 54029 + 3.A.1.104.1
TC MGYG000002025_3 MGYG000002025_3_49 54047 55336 + 3.A.1.103.6
pfam MGYG000002025_3 MGYG000002025_3_50 55353 57656 + Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25
CAZyme MGYG000002025_3 MGYG000002025_3_51 57653 58627 + GT2
CAZyme MGYG000002025_3 MGYG000002025_3_52 58631 59851 + GT4
pfam MGYG000002025_3 MGYG000002025_3_53 59841 60767 + 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_10 | GDP_Man_Dehyd
NULL(UNKNOWN) MGYG000002025_3 MGYG000002025_3_54 60813 62255 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000002025_3 MGYG000002025_3_55 62311 64518 + GT4
pfam MGYG000002025_3 MGYG000002025_3_56 64528 65994 + ATP-grasp_3 | Dala_Dala_lig_C | ATP-grasp_4
pfam MGYG000002025_3 MGYG000002025_3_57 66194 66616 + EamA
TC MGYG000002025_3 MGYG000002025_3_58 66609 66953 + 2.A.7.33.5
NULL(UNKNOWN) MGYG000002025_3 MGYG000002025_3_59 66989 67087 + NULL(UNKNOWN)
[View Structural Homologs]
STP MGYG000002025_3 MGYG000002025_3_60 67166 68302 + Aminotran_1_2
CAZyme MGYG000002025_3 MGYG000002025_3_61 68337 70172 + GT2 | GT2
CAZyme MGYG000002025_3 MGYG000002025_3_62 70179 71138 + GT2
TC MGYG000002025_3 MGYG000002025_3_63 71183 72583 + 9.B.18.1.1
pfam MGYG000002025_3 MGYG000002025_3_64 72611 74356 + LytR_cpsA_psr
CAZyme MGYG000002025_3 MGYG000002025_3_65 74356 75273 + GT2
Gene ID: MGYG000002025_3_46
Type: TC
Location: 50687 - 52084 (+)
Gene ID: MGYG000002025_3_47
Type: CAZyme
Location: 52024 - 52932 (+)
Gene ID: MGYG000002025_3_48
Type: TC
Location: 53229 - 54029 (+)
Gene ID: MGYG000002025_3_49
Type: TC
Location: 54047 - 55336 (+)
Gene ID: MGYG000002025_3_50
Type: pfam
Location: 55353 - 57656 (+)
Gene ID: MGYG000002025_3_51
Type: CAZyme
Location: 57653 - 58627 (+)
Gene ID: MGYG000002025_3_52
Type: CAZyme
Location: 58631 - 59851 (+)
Gene ID: MGYG000002025_3_53
Type: pfam
Location: 59841 - 60767 (+)
Gene ID: MGYG000002025_3_54
Type:
Location: 60813 - 62255 (+)
Gene ID: MGYG000002025_3_55
Type: CAZyme
Location: 62311 - 64518 (+)
Gene ID: MGYG000002025_3_56
Type: pfam
Location: 64528 - 65994 (+)
Gene ID: MGYG000002025_3_57
Type: pfam
Location: 66194 - 66616 (+)
Gene ID: MGYG000002025_3_58
Type: TC
Location: 66609 - 66953 (+)
Gene ID: MGYG000002025_3_59
Type:
Location: 66989 - 67087 (+)
Gene ID: MGYG000002025_3_60
Type: STP
Location: 67166 - 68302 (+)
Gene ID: MGYG000002025_3_61
Type: CAZyme
Location: 68337 - 70172 (+)
Gene ID: MGYG000002025_3_62
Type: CAZyme
Location: 70179 - 71138 (+)
Gene ID: MGYG000002025_3_63
Type: TC
Location: 71183 - 72583 (+)
Gene ID: MGYG000002025_3_64
Type: pfam
Location: 72611 - 74356 (+)
Gene ID: MGYG000002025_3_65
Type: CAZyme
Location: 74356 - 75273 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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