Cluster: MGYG000002025_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002025
- CGC Family ID: CGCFAM_00047
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002025_47 | MGYG000002025_47_6 | 4401 | 6836 | - | GH94 |
| TF | MGYG000002025_47 | MGYG000002025_47_7 | 7263 | 8303 | + | LacI |
| NULL(UNKNOWN) | MGYG000002025_47 | MGYG000002025_47_8 | 8300 | 9625 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002025_47 | MGYG000002025_47_9 | 9890 | 10804 | + | 3.A.1.1.4 |
| TC | MGYG000002025_47 | MGYG000002025_47_10 | 10816 | 11676 | + | 3.A.1.1.26 |
| CAZyme | MGYG000002025_47 | MGYG000002025_47_11 | 11681 | 13039 | + | GH1 |
Gene ID: MGYG000002025_47_6
Type: CAZyme
Location: 4401 - 6836 (-)
Type: CAZyme
Location: 4401 - 6836 (-)
Gene ID: MGYG000002025_47_7
Type: TF
Location: 7263 - 8303 (+)
Type: TF
Location: 7263 - 8303 (+)
Gene ID: MGYG000002025_47_8
Type:
Location: 8300 - 9625 (+)
Type:
Location: 8300 - 9625 (+)
Gene ID: MGYG000002025_47_9
Type: TC
Location: 9890 - 10804 (+)
Type: TC
Location: 9890 - 10804 (+)
Gene ID: MGYG000002025_47_10
Type: TC
Location: 10816 - 11676 (+)
Type: TC
Location: 10816 - 11676 (+)
Gene ID: MGYG000002025_47_11
Type: CAZyme
Location: 11681 - 13039 (+)
Type: CAZyme
Location: 11681 - 13039 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Merdiplasma
Species
Merdiplasma sp905207905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.