Cluster: MGYG000002025_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002025
- CGC Family ID: CGCFAM_00220
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002025_39 | MGYG000002025_39_1 | 2 | 2596 | + | 9.B.144.1.5 |
| NULL(UNKNOWN) | MGYG000002025_39 | MGYG000002025_39_2 | 2526 | 4121 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002025_39 | MGYG000002025_39_3 | 4407 | 5444 | + | GT2 |
| pfam | MGYG000002025_39 | MGYG000002025_39_4 | 5441 | 6616 | + | GARS_A | ATP-grasp | ATP-grasp_3 | Dala_Dala_lig_C | ATP-grasp_4 | LAL_C2 |
| NULL(UNKNOWN) | MGYG000002025_39 | MGYG000002025_39_5 | 6673 | 7986 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002025_39 | MGYG000002025_39_6 | 8371 | 11196 | + | 3.A.3.23.2 |
Gene ID: MGYG000002025_39_1
Type: TC
Location: 2 - 2596 (+)
Type: TC
Location: 2 - 2596 (+)
Gene ID: MGYG000002025_39_2
Type:
Location: 2526 - 4121 (-)
Type:
Location: 2526 - 4121 (-)
Gene ID: MGYG000002025_39_3
Type: CAZyme
Location: 4407 - 5444 (+)
Type: CAZyme
Location: 4407 - 5444 (+)
Gene ID: MGYG000002025_39_4
Type: pfam
Location: 5441 - 6616 (+)
Type: pfam
Location: 5441 - 6616 (+)
Gene ID: MGYG000002025_39_5
Type:
Location: 6673 - 7986 (+)
Type:
Location: 6673 - 7986 (+)
Gene ID: MGYG000002025_39_6
Type: TC
Location: 8371 - 11196 (+)
Type: TC
Location: 8371 - 11196 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Merdiplasma
Species
Merdiplasma sp905207905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.