Cluster: MGYG000002025_CGC17
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000002025
- CGC Family ID: CGCFAM_00009
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002025_14 | MGYG000002025_14_29 | 33317 | 34015 | + | GT2 |
| pfam | MGYG000002025_14 | MGYG000002025_14_30 | 34020 | 34487 | + | DUF2304 |
| CAZyme | MGYG000002025_14 | MGYG000002025_14_31 | 34598 | 35398 | + | GT2 |
| CAZyme | MGYG000002025_14 | MGYG000002025_14_32 | 35392 | 36327 | - | GT2 |
| CAZyme | MGYG000002025_14 | MGYG000002025_14_33 | 36338 | 37318 | - | GT8 |
| NULL(UNKNOWN) | MGYG000002025_14 | MGYG000002025_14_34 | 37733 | 38791 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | MGYG000002025_14 | MGYG000002025_14_35 | 38795 | 39928 | + | Aminotran_1_2 |
| TC | MGYG000002025_14 | MGYG000002025_14_36 | 39925 | 40725 | + | 3.A.1.104.1 |
| TC | MGYG000002025_14 | MGYG000002025_14_37 | 40742 | 42055 | + | 3.A.1.103.6 |
| pfam | MGYG000002025_14 | MGYG000002025_14_38 | 42104 | 42859 | + | Ubie_methyltran | NodS | Methyltransf_PK | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| CAZyme | MGYG000002025_14 | MGYG000002025_14_39 | 43105 | 44769 | + | GT2 |
Gene ID: MGYG000002025_14_29
Type: CAZyme
Location: 33317 - 34015 (+)
Type: CAZyme
Location: 33317 - 34015 (+)
Gene ID: MGYG000002025_14_30
Type: pfam
Location: 34020 - 34487 (+)
Type: pfam
Location: 34020 - 34487 (+)
Gene ID: MGYG000002025_14_31
Type: CAZyme
Location: 34598 - 35398 (+)
Type: CAZyme
Location: 34598 - 35398 (+)
Gene ID: MGYG000002025_14_32
Type: CAZyme
Location: 35392 - 36327 (-)
Type: CAZyme
Location: 35392 - 36327 (-)
Gene ID: MGYG000002025_14_33
Type: CAZyme
Location: 36338 - 37318 (-)
Type: CAZyme
Location: 36338 - 37318 (-)
Gene ID: MGYG000002025_14_34
Type:
Location: 37733 - 38791 (+)
Type:
Location: 37733 - 38791 (+)
Gene ID: MGYG000002025_14_35
Type: STP
Location: 38795 - 39928 (+)
Type: STP
Location: 38795 - 39928 (+)
Gene ID: MGYG000002025_14_36
Type: TC
Location: 39925 - 40725 (+)
Type: TC
Location: 39925 - 40725 (+)
Gene ID: MGYG000002025_14_37
Type: TC
Location: 40742 - 42055 (+)
Type: TC
Location: 40742 - 42055 (+)
Gene ID: MGYG000002025_14_38
Type: pfam
Location: 42104 - 42859 (+)
Type: pfam
Location: 42104 - 42859 (+)
Gene ID: MGYG000002025_14_39
Type: CAZyme
Location: 43105 - 44769 (+)
Type: CAZyme
Location: 43105 - 44769 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Merdiplasma
Species
Merdiplasma sp905207905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.